Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 AC007613.1-201ENST00000572811 2597 ntBASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 CR392000.1-201ENST00000624770 1228 ntBASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00346Q8IVM7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 KRT18P29-201ENST00000397031 1267 ntBASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 KSR1P1-201ENST00000446298 240 ntBASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 AL353708.3-201ENST00000610272 989 ntBASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 AL359736.2-201ENST00000621992 437 ntBASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00346Q8IVM7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 BCL2-203ENST00000589955 5011 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 RCC2P6-201ENST00000526625 1557 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 KRT16P1-201ENST00000399124 1418 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 AL353807.1-201ENST00000427475 662 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 AC091390.4-202ENST00000476426 537 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00346Q8IVM7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LINC00346Q8IVM7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms