Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21■□□□□ 0.95
TRIM50Q86XT4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM50Q86XT4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21■□□□□ 0.95
TRIM50Q86XT4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 AC008556.1-201ENST00000610908 2040 ntBASIC20.99■□□□□ 0.95
TRIM50Q86XT4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 AL512353.2-201ENST00000448759 1962 ntBASIC20.99■□□□□ 0.95
TRIM50Q86XT4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM50Q86XT4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 HBZP1-201ENST00000354915 429 ntBASIC20.98■□□□□ 0.95
TRIM50Q86XT4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 SEC1P-202ENST00000473944 940 ntBASIC20.98■□□□□ 0.95
TRIM50Q86XT4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM50Q86XT4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.97■□□□□ 0.95
TRIM50Q86XT4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 KRT18P56-201ENST00000507275 550 ntBASIC20.97■□□□□ 0.95
TRIM50Q86XT4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM50Q86XT4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM50Q86XT4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms