Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 TSPY20P-201ENST00000450910 630 ntBASIC19.56■□□□□ 0.72
LRRC38Q5VT99 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 KRT8P45-201ENST00000414328 1447 ntBASIC19.56■□□□□ 0.72
LRRC38Q5VT99 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 AC096733.2-201ENST00000609937 1394 ntBASIC19.56■□□□□ 0.72
LRRC38Q5VT99 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 AC116562.2-201ENST00000507042 360 ntBASIC19.55■□□□□ 0.72
LRRC38Q5VT99 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 AL162741.1-201ENST00000565563 1558 ntBASIC19.55■□□□□ 0.72
LRRC38Q5VT99 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 CD177P1-201ENST00000606252 935 ntBASIC19.55■□□□□ 0.72
LRRC38Q5VT99 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 RCC2P3-201ENST00000418112 1537 ntBASIC19.55■□□□□ 0.72
LRRC38Q5VT99 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
LRRC38Q5VT99 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 PRORSD1P-201ENST00000295112 541 ntBASIC19.54■□□□□ 0.72
LRRC38Q5VT99 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 FAM197Y1-201ENST00000421178 764 ntBASIC19.54■□□□□ 0.72
LRRC38Q5VT99 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 DGCR10-201ENST00000609839 495 ntBASIC19.54■□□□□ 0.72
LRRC38Q5VT99 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 AL109659.2-201ENST00000606809 1674 ntBASIC19.54■□□□□ 0.72
LRRC38Q5VT99 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC38Q5VT99 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 AL499627.1-201ENST00000569373 2188 ntBASIC19.53■□□□□ 0.72
LRRC38Q5VT99 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC38Q5VT99 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms