Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 AC020907.5-201ENST00000624372 1936 ntBASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 HES2-202ENST00000377836 507 ntTSL 2 BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC30.76■■■□□ 2.51
SNAPC4Q5SXM2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 RPSAP43-201ENST00000402237 625 ntBASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 AL591684.3-201ENST00000605187 298 ntBASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SNAPC4Q5SXM2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AL353692.3-201ENST00000407031 1396 ntBASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AC024563.2-201ENST00000603282 481 ntBASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AL355877.3-201ENST00000622820 899 ntBASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 AC116407.3-201ENST00000623905 1129 ntBASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SNAPC4Q5SXM2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SNAPC4Q5SXM2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 SCARNA2-201ENST00000458748 420 ntBASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
SNAPC4Q5SXM2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 NMU-202ENST00000505262 693 ntTSL 3 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC30.71■■■□□ 2.51
SNAPC4Q5SXM2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 MED15P5-201ENST00000423150 992 ntBASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 MIR5100-201ENST00000579544 119 ntBASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 AL356488.2-201ENST00000602755 427 ntBASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SNAPC4Q5SXM2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SNAPC4Q5SXM2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SNAPC4Q5SXM2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
SNAPC4Q5SXM2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SNAPC4Q5SXM2 HIST2H3DP1-201ENST00000401004 416 ntBASIC30.7■■■□□ 2.5
SNAPC4Q5SXM2 KRT89P-201ENST00000620027 1478 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms