Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 AL023284.2-201ENST00000405850 579 ntBASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 AL591424.1-201ENST00000442569 1213 ntBASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 METTL21AP1-201ENST00000438852 635 ntBASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 HNRNPDP1-201ENST00000439535 754 ntBASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 AC091607.1-201ENST00000490318 1060 ntBASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 MIR5100-201ENST00000579544 119 ntBASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 GPR32P1-201ENST00000601788 811 ntBASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RSPO4Q2I0M5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RSPO4Q2I0M5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RSPO4Q2I0M5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 KRT18P3-201ENST00000451602 1288 ntBASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RSPO4Q2I0M5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 MCCD1P1-208ENST00000445732 328 ntBASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 RN7SL606P-201ENST00000472779 293 ntBASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 RFPL4AP1-201ENST00000530883 850 ntBASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 AC040169.1-201ENST00000565382 521 ntBASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RSPO4Q2I0M5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms