Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 AL391807.1-203ENST00000604392 2365 ntBASIC22.56■■□□□ 1.2
PDS5AQ29RF7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 MIR662-201ENST00000384847 95 ntBASIC22.56■■□□□ 1.2
PDS5AQ29RF7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDS5AQ29RF7 AC083906.6-201ENST00000641366 219 ntBASIC22.56■■□□□ 1.2
PDS5AQ29RF7 Z98044.1-201ENST00000632503 1764 ntBASIC22.55■■□□□ 1.2
PDS5AQ29RF7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.55■■□□□ 1.2
PDS5AQ29RF7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.55■■□□□ 1.2
PDS5AQ29RF7 AC005332.7-201ENST00000614046 2005 ntBASIC22.54■■□□□ 1.2
PDS5AQ29RF7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 PVRIG2P-201ENST00000435460 978 ntBASIC22.54■■□□□ 1.2
PDS5AQ29RF7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 AC093525.10-201ENST00000625130 1569 ntBASIC22.54■■□□□ 1.2
PDS5AQ29RF7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.54■■□□□ 1.2
PDS5AQ29RF7 AL161938.1-201ENST00000569833 2180 ntBASIC22.54■■□□□ 1.2
PDS5AQ29RF7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 AC007952.6-201ENST00000573168 2673 ntBASIC22.53■■□□□ 1.2
PDS5AQ29RF7 AC003957.1-201ENST00000625108 2673 ntBASIC22.53■■□□□ 1.2
PDS5AQ29RF7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.53■■□□□ 1.2
PDS5AQ29RF7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 ATP5G2P1-201ENST00000433580 426 ntBASIC22.53■■□□□ 1.2
PDS5AQ29RF7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.53■■□□□ 1.2
PDS5AQ29RF7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 AL162741.1-201ENST00000565563 1558 ntBASIC22.52■■□□□ 1.2
PDS5AQ29RF7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.52■■□□□ 1.2
PDS5AQ29RF7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms