Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SPCS3P61009 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 OR6D1P-202ENST00000641007 5290 ntBASIC15.32■□□□□ 0.04
SPCS3P61009 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SPCS3P61009 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SPCS3P61009 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 AC026185.1-201ENST00000445748 174 ntBASIC15.31■□□□□ 0.04
SPCS3P61009 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.31■□□□□ 0.04
SPCS3P61009 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.31■□□□□ 0.04
SPCS3P61009 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.31■□□□□ 0.04
SPCS3P61009 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.31■□□□□ 0.04
SPCS3P61009 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.31■□□□□ 0.04
SPCS3P61009 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SPCS3P61009 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 ANO7L1-203ENST00000602586 1720 ntBASIC15.31■□□□□ 0.04
SPCS3P61009 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.31■□□□□ 0.04
SPCS3P61009 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SPCS3P61009 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPCS3P61009 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 MIR663A-201ENST00000385250 93 ntBASIC15.3■□□□□ 0.04
SPCS3P61009 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 CDCA4P2-201ENST00000441182 718 ntBASIC15.3■□□□□ 0.04
SPCS3P61009 AC091874.3-201ENST00000512672 1195 ntBASIC15.3■□□□□ 0.04
SPCS3P61009 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 AC092368.3-202ENST00000574180 1591 ntBASIC15.3■□□□□ 0.04
SPCS3P61009 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.3■□□□□ 0.04
SPCS3P61009 PKD1P1-201ENST00000458669 6805 ntBASIC15.3■□□□□ 0.04
SPCS3P61009 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPCS3P61009 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.3■□□□□ 0.04
SPCS3P61009 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms