Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH12P55289 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH12P55289 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH12P55289 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 AP003097.1-201ENST00000530657 1135 ntBASIC17.55■□□□□ 0.4
CDH12P55289 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH12P55289 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CDH12P55289 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH12P55289 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 NBPF21P-201ENST00000425093 1451 ntBASIC17.55■□□□□ 0.4
CDH12P55289 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH12P55289 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CDH12P55289 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH12P55289 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH12P55289 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH12P55289 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH12P55289 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH12P55289 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH12P55289 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 PCDHB18P-201ENST00000524813 2368 ntBASIC17.54■□□□□ 0.4
CDH12P55289 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH12P55289 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH12P55289 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH12P55289 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH12P55289 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDH12P55289 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH12P55289 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CDH12P55289 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDH12P55289 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDH12P55289 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH12P55289 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH12P55289 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.53■□□□□ 0.4
CDH12P55289 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH12P55289 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms