Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN4P51793 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN4P51793 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLCN4P51793 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.8■□□□□ 0.76
CLCN4P51793 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 TSPY22P-201ENST00000427496 604 ntBASIC19.8■□□□□ 0.76
CLCN4P51793 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLCN4P51793 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.8■□□□□ 0.76
CLCN4P51793 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
CLCN4P51793 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLCN4P51793 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.8■□□□□ 0.76
CLCN4P51793 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCN4P51793 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLCN4P51793 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 KRT18P1-202ENST00000452408 1331 ntBASIC19.79■□□□□ 0.76
CLCN4P51793 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCN4P51793 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 AL109659.2-201ENST00000606809 1674 ntBASIC19.79■□□□□ 0.76
CLCN4P51793 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLCN4P51793 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCN4P51793 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.79■□□□□ 0.76
CLCN4P51793 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLCN4P51793 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
CLCN4P51793 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCN4P51793 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCN4P51793 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCN4P51793 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 FAAHP1-202ENST00000446499 1238 ntBASIC19.78■□□□□ 0.76
CLCN4P51793 KRT17P6-201ENST00000453795 1220 ntBASIC19.78■□□□□ 0.76
CLCN4P51793 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.78■□□□□ 0.76
CLCN4P51793 RNF126P1-202ENST00000569893 925 ntBASIC19.78■□□□□ 0.76
CLCN4P51793 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.78■□□□□ 0.76
CLCN4P51793 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLCN4P51793 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN4P51793 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLCN4P51793 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN4P51793 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLCN4P51793 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
CLCN4P51793 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN4P51793 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLCN4P51793 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN4P51793 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 DRAXINP1-201ENST00000437611 948 ntBASIC19.77■□□□□ 0.76
CLCN4P51793 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN4P51793 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN4P51793 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.77■□□□□ 0.76
CLCN4P51793 TPSP2-201ENST00000561760 610 ntBASIC19.77■□□□□ 0.76
CLCN4P51793 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLCN4P51793 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLCN4P51793 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN4P51793 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCN4P51793 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCN4P51793 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.77■□□□□ 0.76
CLCN4P51793 Z82202.1-201ENST00000623446 1880 ntBASIC19.77■□□□□ 0.76
CLCN4P51793 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN4P51793 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN4P51793 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLCN4P51793 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN4P51793 RCC2P3-201ENST00000418112 1537 ntBASIC19.76■□□□□ 0.75
CLCN4P51793 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN4P51793 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms