Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB28P51157 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 WWOX-216ENST00000569818 525 ntBASIC18.18■□□□□ 0.5
RAB28P51157 MIR3180-5-201ENST00000583743 153 ntBASIC18.18■□□□□ 0.5
RAB28P51157 CR769767.2-201ENST00000622735 460 ntBASIC18.18■□□□□ 0.5
RAB28P51157 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RAB28P51157 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB28P51157 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB28P51157 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB28P51157 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB28P51157 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 AC073508.3-201ENST00000619697 1419 ntBASIC18.17■□□□□ 0.5
RAB28P51157 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB28P51157 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 AC008556.1-201ENST00000610908 2040 ntBASIC18.17■□□□□ 0.5
RAB28P51157 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB28P51157 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.17■□□□□ 0.5
RAB28P51157 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB28P51157 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB28P51157 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.17■□□□□ 0.5
RAB28P51157 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB28P51157 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 AC036111.1-201ENST00000533973 1582 ntBASIC18.17■□□□□ 0.5
RAB28P51157 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB28P51157 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB28P51157 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB28P51157 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB28P51157 AC006333.2-201ENST00000607957 2099 ntBASIC18.16■□□□□ 0.5
RAB28P51157 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.16■□□□□ 0.5
RAB28P51157 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB28P51157 AL138966.2-201ENST00000621997 464 ntBASIC18.16■□□□□ 0.5
RAB28P51157 AC092865.7-201ENST00000641832 219 ntBASIC18.16■□□□□ 0.5
RAB28P51157 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB28P51157 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB28P51157 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB28P51157 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB28P51157 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB28P51157 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB28P51157 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 RCN1P1-201ENST00000400413 996 ntBASIC18.15■□□□□ 0.5
RAB28P51157 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB28P51157 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB28P51157 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RAB28P51157 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB28P51157 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB28P51157 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB28P51157 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB28P51157 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RAB28P51157 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms