Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC1A1P43005 CD99P1-205ENST00000527459 561 ntBASIC19.72■□□□□ 0.75
SLC1A1P43005 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 RARRES2P10-201ENST00000564312 460 ntBASIC19.72■□□□□ 0.75
SLC1A1P43005 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 MYC-208ENST00000641036 567 ntBASIC19.72■□□□□ 0.75
SLC1A1P43005 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC1A1P43005 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC1A1P43005 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC1A1P43005 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SLC1A1P43005 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC1A1P43005 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC1A1P43005 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC1A1P43005 AC126763.1-201ENST00000552015 2118 ntBASIC19.71■□□□□ 0.75
SLC1A1P43005 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
SLC1A1P43005 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC1A1P43005 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC1A1P43005 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC1A1P43005 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC1A1P43005 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC1A1P43005 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC1A1P43005 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC1A1P43005 RPPH1-201ENST00000516869 333 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 CKBP1-201ENST00000565489 1086 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 AF186192.3-201ENST00000583427 947 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.7■□□□□ 0.74
SLC1A1P43005 AC073195.1-201ENST00000607241 877 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 AC130371.2-201ENST00000619443 611 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
SLC1A1P43005 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SLC1A1P43005 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC1A1P43005 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC1A1P43005 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SLC1A1P43005 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC1A1P43005 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 AC011298.2-201ENST00000617989 482 ntBASIC19.69■□□□□ 0.74
SLC1A1P43005 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC1A1P43005 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC1A1P43005 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC1A1P43005 AC020763.4-201ENST00000623414 4170 ntBASIC19.69■□□□□ 0.74
SLC1A1P43005 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC1A1P43005 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC1A1P43005 AL162741.1-201ENST00000565563 1558 ntBASIC19.69■□□□□ 0.74
SLC1A1P43005 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC1A1P43005 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms