Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL1P09341 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL1P09341 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCL1P09341 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CXCL1P09341 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCL1P09341 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CXCL1P09341 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CXCL1P09341 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CXCL1P09341 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 KRT16P6-202ENST00000425692 1426 ntBASIC14.61□□□□□ -0.07
CXCL1P09341 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL1P09341 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CXCL1P09341 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.61□□□□□ -0.07
CXCL1P09341 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL1P09341 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL1P09341 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.6□□□□□ -0.07
CXCL1P09341 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCL1P09341 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 IRX1P1-201ENST00000438849 1838 ntBASIC14.6□□□□□ -0.07
CXCL1P09341 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CXCL1P09341 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.6□□□□□ -0.07
CXCL1P09341 MIR6084-201ENST00000622012 110 ntBASIC14.6□□□□□ -0.07
CXCL1P09341 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CXCL1P09341 AC019069.1-201ENST00000610008 1333 ntBASIC14.6□□□□□ -0.07
CXCL1P09341 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL1P09341 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCL1P09341 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CXCL1P09341 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.59□□□□□ -0.07
CXCL1P09341 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CXCL1P09341 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.59□□□□□ -0.07
CXCL1P09341 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CXCL1P09341 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.59□□□□□ -0.07
CXCL1P09341 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.59□□□□□ -0.07
CXCL1P09341 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.59□□□□□ -0.07
CXCL1P09341 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.59□□□□□ -0.07
CXCL1P09341 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.59□□□□□ -0.07
CXCL1P09341 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.59□□□□□ -0.07
CXCL1P09341 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CXCL1P09341 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms