Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL4A2P08572 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.97■□□□□ 0.63
COL4A2P08572 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
COL4A2P08572 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.97■□□□□ 0.63
COL4A2P08572 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL4A2P08572 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.96■□□□□ 0.63
COL4A2P08572 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.96■□□□□ 0.63
COL4A2P08572 BNIP3P18-201ENST00000593976 575 ntBASIC18.96■□□□□ 0.63
COL4A2P08572 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.96■□□□□ 0.63
COL4A2P08572 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 AC006333.2-201ENST00000607957 2099 ntBASIC18.96■□□□□ 0.63
COL4A2P08572 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.96■□□□□ 0.63
COL4A2P08572 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.96■□□□□ 0.63
COL4A2P08572 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL4A2P08572 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A2P08572 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A2P08572 AF238378.1-201ENST00000526806 358 ntBASIC18.95■□□□□ 0.62
COL4A2P08572 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 AC005336.2-201ENST00000593183 939 ntBASIC18.95■□□□□ 0.62
COL4A2P08572 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A2P08572 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.95■□□□□ 0.62
COL4A2P08572 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 KRT8P32-201ENST00000512863 1461 ntBASIC18.95■□□□□ 0.62
COL4A2P08572 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.95■□□□□ 0.62
COL4A2P08572 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL4A2P08572 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.94■□□□□ 0.62
COL4A2P08572 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.94■□□□□ 0.62
COL4A2P08572 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 MIR3180-4-201ENST00000582223 153 ntBASIC18.94■□□□□ 0.62
COL4A2P08572 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.94■□□□□ 0.62
COL4A2P08572 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 AC125437.2-201ENST00000625180 2167 ntBASIC18.94■□□□□ 0.62
COL4A2P08572 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL4A2P08572 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL4A2P08572 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A2P08572 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL4A2P08572 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 AC005332.3-201ENST00000589904 676 ntBASIC18.94■□□□□ 0.62
COL4A2P08572 AC024563.2-201ENST00000603282 481 ntBASIC18.94■□□□□ 0.62
COL4A2P08572 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COL4A2P08572 LINC01521-201ENST00000504184 1943 ntBASIC18.94■□□□□ 0.62
COL4A2P08572 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A2P08572 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A2P08572 MTMR9LP-203ENST00000426597 1545 ntBASIC18.93■□□□□ 0.62
COL4A2P08572 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A2P08572 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL4A2P08572 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A2P08572 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A2P08572 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A2P08572 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A2P08572 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms