Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC01711-201ENST00000598340 967 ntBASIC18.97■□□□□ 0.63
RETP07949 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
RETP07949 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RETP07949 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.97■□□□□ 0.63
RETP07949 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RETP07949 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RETP07949 KRT8P41-201ENST00000533985 1514 ntBASIC18.96■□□□□ 0.63
RETP07949 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RETP07949 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.96■□□□□ 0.63
RETP07949 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 TSPY19P-201ENST00000418461 509 ntBASIC18.96■□□□□ 0.63
RETP07949 TSPY18P-201ENST00000441642 509 ntBASIC18.96■□□□□ 0.63
RETP07949 AC092597.1-201ENST00000487352 616 ntBASIC18.96■□□□□ 0.63
RETP07949 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.96■□□□□ 0.63
RETP07949 AP002414.4-201ENST00000589764 1148 ntBASIC18.96■□□□□ 0.63
RETP07949 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.96■□□□□ 0.63
RETP07949 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RETP07949 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RETP07949 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.96■□□□□ 0.63
RETP07949 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.95■□□□□ 0.62
RETP07949 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.95■□□□□ 0.62
RETP07949 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.95■□□□□ 0.62
RETP07949 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RETP07949 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 AL121772.3-201ENST00000610840 674 ntBASIC18.95■□□□□ 0.62
RETP07949 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RETP07949 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RETP07949 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.95■□□□□ 0.62
RETP07949 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.94■□□□□ 0.62
RETP07949 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.94■□□□□ 0.62
RETP07949 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.94■□□□□ 0.62
RETP07949 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.94■□□□□ 0.62
RETP07949 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RETP07949 AC091304.2-201ENST00000564639 760 ntBASIC18.94■□□□□ 0.62
RETP07949 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.94■□□□□ 0.62
RETP07949 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.94■□□□□ 0.62
RETP07949 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RETP07949 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RETP07949 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.94■□□□□ 0.62
RETP07949 AC098818.2-201ENST00000564925 2320 ntBASIC18.94■□□□□ 0.62
RETP07949 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RETP07949 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RETP07949 AC106795.1-205ENST00000512851 1056 ntBASIC18.93■□□□□ 0.62
RETP07949 KRT8P26-201ENST00000534154 1276 ntBASIC18.93■□□□□ 0.62
RETP07949 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 AL662844.1-201ENST00000546340 181 ntBASIC18.93■□□□□ 0.62
RETP07949 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.93■□□□□ 0.62
RETP07949 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.93■□□□□ 0.62
RETP07949 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.93■□□□□ 0.62
RETP07949 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.93■□□□□ 0.62
RETP07949 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms