Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TCRAP04437 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRAP04437 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.34□□□□□ -0.11
TCRAP04437 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 AC087623.3-201ENST00000607047 1098 ntBASIC14.34□□□□□ -0.11
TCRAP04437 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRAP04437 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRAP04437 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TCRAP04437 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TCRAP04437 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TCRAP04437 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRAP04437 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TCRAP04437 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.33□□□□□ -0.11
TCRAP04437 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.33□□□□□ -0.11
TCRAP04437 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TCRAP04437 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TCRAP04437 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 PKD1P1-201ENST00000458669 6805 ntBASIC14.33□□□□□ -0.12
TCRAP04437 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.33□□□□□ -0.12
TCRAP04437 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRAP04437 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRAP04437 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRAP04437 BX276092.2-201ENST00000417668 665 ntBASIC14.33□□□□□ -0.12
TCRAP04437 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.33□□□□□ -0.12
TCRAP04437 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.33□□□□□ -0.12
TCRAP04437 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.33□□□□□ -0.12
TCRAP04437 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.33□□□□□ -0.12
TCRAP04437 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRAP04437 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.33□□□□□ -0.12
TCRAP04437 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TCRAP04437 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TCRAP04437 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TCRAP04437 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TCRAP04437 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TCRAP04437 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.32□□□□□ -0.12
TCRAP04437 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.32□□□□□ -0.12
TCRAP04437 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TCRAP04437 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRAP04437 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms