Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VTNP04004 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.64■□□□□ 0.89
VTNP04004 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTNP04004 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.64■□□□□ 0.89
VTNP04004 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.64■□□□□ 0.89
VTNP04004 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTNP04004 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTNP04004 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.64■□□□□ 0.89
VTNP04004 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VTNP04004 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VTNP04004 AIRN-201ENST00000601203 4374 ntBASIC20.64■□□□□ 0.89
VTNP04004 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VTNP04004 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VTNP04004 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.63■□□□□ 0.89
VTNP04004 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.63■□□□□ 0.89
VTNP04004 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.63■□□□□ 0.89
VTNP04004 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.63■□□□□ 0.89
VTNP04004 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.63■□□□□ 0.89
VTNP04004 AL157888.1-201ENST00000631930 593 ntBASIC20.63■□□□□ 0.89
VTNP04004 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.63■□□□□ 0.89
VTNP04004 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VTNP04004 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VTNP04004 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
VTNP04004 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.62■□□□□ 0.89
VTNP04004 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VTNP04004 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
VTNP04004 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.62■□□□□ 0.89
VTNP04004 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.62■□□□□ 0.89
VTNP04004 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
VTNP04004 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.62■□□□□ 0.89
VTNP04004 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VTNP04004 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.62■□□□□ 0.89
VTNP04004 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VTNP04004 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTNP04004 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VTNP04004 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
VTNP04004 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VTNP04004 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
VTNP04004 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.61■□□□□ 0.89
VTNP04004 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.61■□□□□ 0.89
VTNP04004 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.61■□□□□ 0.89
VTNP04004 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VTNP04004 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 KRT18P23-201ENST00000435622 1283 ntBASIC20.61■□□□□ 0.89
VTNP04004 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.61■□□□□ 0.89
VTNP04004 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.61■□□□□ 0.89
VTNP04004 AC079602.3-201ENST00000623931 403 ntBASIC20.61■□□□□ 0.89
VTNP04004 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.61■□□□□ 0.89
VTNP04004 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.61■□□□□ 0.89
VTNP04004 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTNP04004 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
VTNP04004 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTNP04004 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTNP04004 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTNP04004 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.6■□□□□ 0.89
VTNP04004 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.6■□□□□ 0.89
VTNP04004 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.6■□□□□ 0.89
VTNP04004 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
VTNP04004 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.6■□□□□ 0.89
VTNP04004 AC069148.1-201ENST00000608741 768 ntBASIC20.6■□□□□ 0.89
VTNP04004 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.6■□□□□ 0.89
VTNP04004 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTNP04004 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTNP04004 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms