Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MT-ND3P03897 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-ND3P03897 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-ND3P03897 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MT-ND3P03897 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.18■□□□□ 0.66
MT-ND3P03897 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-ND3P03897 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 AP006587.1-201ENST00000534129 1502 ntBASIC19.18■□□□□ 0.66
MT-ND3P03897 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND3P03897 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MT-ND3P03897 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MT-ND3P03897 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
MT-ND3P03897 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.17■□□□□ 0.66
MT-ND3P03897 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
MT-ND3P03897 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.17■□□□□ 0.66
MT-ND3P03897 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.17■□□□□ 0.66
MT-ND3P03897 MTDHP1-201ENST00000605323 784 ntBASIC19.17■□□□□ 0.66
MT-ND3P03897 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
MT-ND3P03897 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
MT-ND3P03897 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MT-ND3P03897 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND3P03897 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND3P03897 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-ND3P03897 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-ND3P03897 YBX1P10-201ENST00000444752 975 ntBASIC19.16■□□□□ 0.66
MT-ND3P03897 AC133681.1-201ENST00000465482 601 ntBASIC19.16■□□□□ 0.66
MT-ND3P03897 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.16■□□□□ 0.66
MT-ND3P03897 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 AC006557.6-201ENST00000623071 864 ntBASIC19.16■□□□□ 0.66
MT-ND3P03897 AL133373.2-201ENST00000623187 2828 ntBASIC19.16■□□□□ 0.66
MT-ND3P03897 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND3P03897 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND3P03897 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
MT-ND3P03897 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-ND3P03897 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND3P03897 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND3P03897 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
MT-ND3P03897 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND3P03897 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND3P03897 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND3P03897 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND3P03897 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND3P03897 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND3P03897 AC239809.2-201ENST00000415381 517 ntBASIC19.15■□□□□ 0.66
MT-ND3P03897 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.15■□□□□ 0.66
MT-ND3P03897 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-ND3P03897 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms