Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 UNC93B7-201ENST00000509439 705 ntBASIC20.48■□□□□ 0.87
CHRNA1P02708 RN7SL510P-201ENST00000581311 263 ntBASIC20.48■□□□□ 0.87
CHRNA1P02708 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.48■□□□□ 0.87
CHRNA1P02708 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNA1P02708 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNA1P02708 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNA1P02708 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHRNA1P02708 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHRNA1P02708 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHRNA1P02708 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHRNA1P02708 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRNA1P02708 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRNA1P02708 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CHRNA1P02708 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.47■□□□□ 0.87
CHRNA1P02708 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNA1P02708 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNA1P02708 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.46■□□□□ 0.87
CHRNA1P02708 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNA1P02708 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHRNA1P02708 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHRNA1P02708 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNA1P02708 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.46■□□□□ 0.87
CHRNA1P02708 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.46■□□□□ 0.87
CHRNA1P02708 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.46■□□□□ 0.87
CHRNA1P02708 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHRNA1P02708 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CHRNA1P02708 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNA1P02708 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNA1P02708 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
CHRNA1P02708 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.45■□□□□ 0.87
CHRNA1P02708 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.45■□□□□ 0.86
CHRNA1P02708 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.45■□□□□ 0.86
CHRNA1P02708 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 AL158211.5-201ENST00000623583 2518 ntBASIC20.45■□□□□ 0.86
CHRNA1P02708 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHRNA1P02708 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
CHRNA1P02708 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.45■□□□□ 0.86
CHRNA1P02708 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.45■□□□□ 0.86
CHRNA1P02708 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.45■□□□□ 0.86
CHRNA1P02708 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.45■□□□□ 0.86
CHRNA1P02708 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHRNA1P02708 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHRNA1P02708 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.45■□□□□ 0.86
CHRNA1P02708 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.45■□□□□ 0.86
CHRNA1P02708 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 KRT18P1-202ENST00000452408 1331 ntBASIC20.45■□□□□ 0.86
CHRNA1P02708 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRNA1P02708 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.45■□□□□ 0.86
CHRNA1P02708 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms