Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD3O95983 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.59■■□□□ 1.05
MBD3O95983 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
MBD3O95983 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.59■■□□□ 1.05
MBD3O95983 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD3O95983 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.59■■□□□ 1.05
MBD3O95983 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.59■■□□□ 1.05
MBD3O95983 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.59■■□□□ 1.05
MBD3O95983 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
MBD3O95983 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.59■■□□□ 1.05
MBD3O95983 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD3O95983 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.58■■□□□ 1.05
MBD3O95983 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
MBD3O95983 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.58■■□□□ 1.05
MBD3O95983 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.58■■□□□ 1.05
MBD3O95983 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.58■■□□□ 1.05
MBD3O95983 TSPY23P-201ENST00000440136 739 ntBASIC21.58■■□□□ 1.05
MBD3O95983 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.58■■□□□ 1.05
MBD3O95983 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.58■■□□□ 1.05
MBD3O95983 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.58■■□□□ 1.05
MBD3O95983 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MBD3O95983 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MBD3O95983 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MBD3O95983 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MBD3O95983 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
MBD3O95983 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MBD3O95983 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.58■■□□□ 1.04
MBD3O95983 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
MBD3O95983 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 AL499627.1-201ENST00000569373 2188 ntBASIC21.57■■□□□ 1.04
MBD3O95983 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MBD3O95983 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MBD3O95983 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.57■■□□□ 1.04
MBD3O95983 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.57■■□□□ 1.04
MBD3O95983 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MBD3O95983 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.57■■□□□ 1.04
MBD3O95983 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.57■■□□□ 1.04
MBD3O95983 MYC-208ENST00000641036 567 ntBASIC21.57■■□□□ 1.04
MBD3O95983 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 AC139713.2-201ENST00000641328 2723 ntBASIC21.57■■□□□ 1.04
MBD3O95983 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
MBD3O95983 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MBD3O95983 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MBD3O95983 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.57■■□□□ 1.04
MBD3O95983 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
MBD3O95983 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
MBD3O95983 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
MBD3O95983 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MBD3O95983 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 MTMR9LP-203ENST00000426597 1545 ntBASIC21.56■■□□□ 1.04
MBD3O95983 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.56■■□□□ 1.04
MBD3O95983 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MBD3O95983 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MBD3O95983 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
MBD3O95983 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.56■■□□□ 1.04
MBD3O95983 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.56■■□□□ 1.04
MBD3O95983 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
MBD3O95983 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms