Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 KRT18P38-201ENST00000449496 1282 ntBASIC18.81■□□□□ 0.6
PCDH8O95206 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH8O95206 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 MIR3180-5-201ENST00000583743 153 ntBASIC18.81■□□□□ 0.6
PCDH8O95206 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 AC091076.1-201ENST00000610741 619 ntBASIC18.81■□□□□ 0.6
PCDH8O95206 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.81■□□□□ 0.6
PCDH8O95206 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH8O95206 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PCDH8O95206 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH8O95206 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH8O95206 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH8O95206 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH8O95206 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH8O95206 AC120498.9-201ENST00000339021 3867 ntBASIC18.8■□□□□ 0.6
PCDH8O95206 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH8O95206 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDH8O95206 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 IRX1P1-201ENST00000438849 1838 ntBASIC18.8■□□□□ 0.6
PCDH8O95206 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDH8O95206 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH8O95206 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDH8O95206 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH8O95206 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDH8O95206 AC007952.6-201ENST00000573168 2673 ntBASIC18.8■□□□□ 0.6
PCDH8O95206 AC003957.1-201ENST00000625108 2673 ntBASIC18.8■□□□□ 0.6
PCDH8O95206 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH8O95206 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH8O95206 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH8O95206 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH8O95206 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.79■□□□□ 0.6
PCDH8O95206 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PCDH8O95206 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 AC112907.2-201ENST00000448639 330 ntBASIC18.79■□□□□ 0.6
PCDH8O95206 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH8O95206 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 AC024243.1-201ENST00000609234 778 ntBASIC18.79■□□□□ 0.6
PCDH8O95206 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH8O95206 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH8O95206 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH8O95206 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH8O95206 AC141586.3-201ENST00000562166 1838 ntBASIC18.79■□□□□ 0.6
PCDH8O95206 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH8O95206 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PCDH8O95206 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH8O95206 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH8O95206 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH8O95206 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH8O95206 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH8O95206 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH8O95206 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH8O95206 AL121956.5-201ENST00000625261 221 ntBASIC18.78■□□□□ 0.6
PCDH8O95206 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH8O95206 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH8O95206 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms