Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM3O75382 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM3O75382 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM3O75382 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TRIM3O75382 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM3O75382 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM3O75382 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM3O75382 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM3O75382 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM3O75382 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM3O75382 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 Z82202.1-201ENST00000623446 1880 ntBASIC17.54■□□□□ 0.4
TRIM3O75382 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM3O75382 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM3O75382 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRIM3O75382 AC096733.2-201ENST00000609937 1394 ntBASIC17.53■□□□□ 0.4
TRIM3O75382 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM3O75382 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM3O75382 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRIM3O75382 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM3O75382 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 CYP2D8P-201ENST00000433633 1490 ntBASIC17.53■□□□□ 0.4
TRIM3O75382 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 CRYGFP-201ENST00000418459 633 ntBASIC17.53■□□□□ 0.4
TRIM3O75382 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 SLC25A1P4-201ENST00000567977 778 ntBASIC17.53■□□□□ 0.4
TRIM3O75382 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM3O75382 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM3O75382 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM3O75382 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM3O75382 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM3O75382 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM3O75382 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 AL138781.2-201ENST00000617896 1843 ntBASIC17.52■□□□□ 0.4
TRIM3O75382 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM3O75382 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM3O75382 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM3O75382 NAPSB-206ENST00000562112 1266 ntBASIC17.52■□□□□ 0.4
TRIM3O75382 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms