Protein–RNA interactions for Protein: O75064

DENND4B, DENN domain-containing protein 4B, humanhuman

Predicted RBP Predictions only

Length 1,496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4BO75064 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DENND4BO75064 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
DENND4BO75064 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC28.61■■■□□ 2.17
DENND4BO75064 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
DENND4BO75064 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
DENND4BO75064 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.6■■■□□ 2.17
DENND4BO75064 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.6■■■□□ 2.17
DENND4BO75064 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC28.6■■■□□ 2.17
DENND4BO75064 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
DENND4BO75064 AC005332.3-201ENST00000589904 676 ntBASIC28.6■■■□□ 2.17
DENND4BO75064 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.6■■■□□ 2.17
DENND4BO75064 AC064862.7-201ENST00000604520 867 ntBASIC28.6■■■□□ 2.17
DENND4BO75064 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC28.6■■■□□ 2.17
DENND4BO75064 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
DENND4BO75064 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4BO75064 FAM220CP-201ENST00000395253 831 ntBASIC28.59■■■□□ 2.17
DENND4BO75064 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.59■■■□□ 2.17
DENND4BO75064 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC28.59■■■□□ 2.17
DENND4BO75064 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4BO75064 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC28.59■■■□□ 2.17
DENND4BO75064 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC28.59■■■□□ 2.17
DENND4BO75064 AC092865.5-201ENST00000545435 363 ntBASIC28.59■■■□□ 2.17
DENND4BO75064 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4BO75064 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4BO75064 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.59■■■□□ 2.17
DENND4BO75064 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DENND4BO75064 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.59■■■□□ 2.17
DENND4BO75064 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
DENND4BO75064 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC28.59■■■□□ 2.17
DENND4BO75064 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.59■■■□□ 2.17
DENND4BO75064 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.59■■■□□ 2.17
DENND4BO75064 AL592071.1-201ENST00000611956 408 ntBASIC28.59■■■□□ 2.17
DENND4BO75064 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4BO75064 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4BO75064 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4BO75064 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4BO75064 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.58■■■□□ 2.17
DENND4BO75064 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.58■■■□□ 2.17
DENND4BO75064 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.58■■■□□ 2.17
DENND4BO75064 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.58■■■□□ 2.17
DENND4BO75064 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
DENND4BO75064 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.58■■■□□ 2.17
DENND4BO75064 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.16
DENND4BO75064 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.57■■■□□ 2.16
DENND4BO75064 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.57■■■□□ 2.16
DENND4BO75064 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.57■■■□□ 2.16
DENND4BO75064 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC28.57■■■□□ 2.16
DENND4BO75064 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC28.57■■■□□ 2.16
DENND4BO75064 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.57■■■□□ 2.16
DENND4BO75064 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.57■■■□□ 2.16
DENND4BO75064 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.57■■■□□ 2.16
DENND4BO75064 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC28.57■■■□□ 2.16
DENND4BO75064 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DENND4BO75064 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC28.56■■■□□ 2.16
DENND4BO75064 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
DENND4BO75064 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
DENND4BO75064 TREX1-205ENST00000625293 1783 ntBASIC28.56■■■□□ 2.16
DENND4BO75064 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
DENND4BO75064 NSUN5P1-202ENST00000421140 1535 ntBASIC28.56■■■□□ 2.16
DENND4BO75064 NSUN5P2-203ENST00000457352 1529 ntBASIC28.56■■■□□ 2.16
DENND4BO75064 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
DENND4BO75064 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
DENND4BO75064 AP003733.1-201ENST00000491725 852 ntBASIC28.56■■■□□ 2.16
DENND4BO75064 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.56■■■□□ 2.16
DENND4BO75064 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
DENND4BO75064 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.56■■■□□ 2.16
DENND4BO75064 MED17-221ENST00000639724 2317 ntTSL 5 BASIC28.56■■■□□ 2.16
DENND4BO75064 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
DENND4BO75064 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC28.55■■■□□ 2.16
DENND4BO75064 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.55■■■□□ 2.16
DENND4BO75064 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DENND4BO75064 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms