Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA12O60330 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA12O60330 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA12O60330 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA12O60330 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA12O60330 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA12O60330 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 SPDYE15P-201ENST00000424157 909 ntBASIC18.64■□□□□ 0.57
PCDHGA12O60330 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA12O60330 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA12O60330 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA12O60330 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA12O60330 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 AP000974.1-201ENST00000623909 2387 ntBASIC18.63■□□□□ 0.57
PCDHGA12O60330 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA12O60330 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA12O60330 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms