Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
URB1O60287 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.75■□□□□ 0.43
URB1O60287 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 KRT18P67-201ENST00000432816 1264 ntBASIC17.75■□□□□ 0.43
URB1O60287 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.75■□□□□ 0.43
URB1O60287 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 PMS2P7-201ENST00000506558 1336 ntBASIC17.75■□□□□ 0.43
URB1O60287 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.75■□□□□ 0.43
URB1O60287 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
URB1O60287 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
URB1O60287 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
URB1O60287 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.75■□□□□ 0.43
URB1O60287 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
URB1O60287 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
URB1O60287 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.74■□□□□ 0.43
URB1O60287 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.74■□□□□ 0.43
URB1O60287 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.74■□□□□ 0.43
URB1O60287 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.74■□□□□ 0.43
URB1O60287 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.74■□□□□ 0.43
URB1O60287 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
URB1O60287 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.74■□□□□ 0.43
URB1O60287 AC005104.2-201ENST00000427818 678 ntBASIC17.74■□□□□ 0.43
URB1O60287 FAM197Y8-203ENST00000450145 560 ntBASIC17.74■□□□□ 0.43
URB1O60287 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
URB1O60287 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.74■□□□□ 0.43
URB1O60287 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.74■□□□□ 0.43
URB1O60287 AL136038.4-201ENST00000603606 1261 ntBASIC17.74■□□□□ 0.43
URB1O60287 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
URB1O60287 AC233702.3-201ENST00000578656 1387 ntBASIC17.74■□□□□ 0.43
URB1O60287 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
URB1O60287 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.73■□□□□ 0.43
URB1O60287 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
URB1O60287 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.73■□□□□ 0.43
URB1O60287 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
URB1O60287 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.73■□□□□ 0.43
URB1O60287 AL157888.1-201ENST00000631930 593 ntBASIC17.73■□□□□ 0.43
URB1O60287 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.73■□□□□ 0.43
URB1O60287 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
URB1O60287 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.73■□□□□ 0.43
URB1O60287 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.73■□□□□ 0.43
URB1O60287 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.73■□□□□ 0.43
URB1O60287 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.73■□□□□ 0.43
URB1O60287 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
URB1O60287 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.72■□□□□ 0.43
URB1O60287 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.72■□□□□ 0.43
URB1O60287 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
URB1O60287 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.72■□□□□ 0.43
URB1O60287 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.72■□□□□ 0.43
URB1O60287 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms