Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.49■■□□□ 1.67
MSH5O43196 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MSH5O43196 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.49■■□□□ 1.67
MSH5O43196 AL031985.4-201ENST00000642138 673 ntBASIC25.49■■□□□ 1.67
MSH5O43196 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
MSH5O43196 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.49■■□□□ 1.67
MSH5O43196 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MSH5O43196 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MSH5O43196 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MSH5O43196 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
MSH5O43196 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC25.48■■□□□ 1.67
MSH5O43196 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.48■■□□□ 1.67
MSH5O43196 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.48■■□□□ 1.67
MSH5O43196 AC100757.3-201ENST00000622361 1406 ntBASIC25.48■■□□□ 1.67
MSH5O43196 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
MSH5O43196 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MSH5O43196 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MSH5O43196 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC25.48■■□□□ 1.67
MSH5O43196 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC25.48■■□□□ 1.67
MSH5O43196 BX664615.1-201ENST00000443558 458 ntBASIC25.48■■□□□ 1.67
MSH5O43196 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.48■■□□□ 1.67
MSH5O43196 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.48■■□□□ 1.67
MSH5O43196 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC25.48■■□□□ 1.67
MSH5O43196 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.48■■□□□ 1.67
MSH5O43196 SRPK2P-201ENST00000523408 1100 ntBASIC25.48■■□□□ 1.67
MSH5O43196 EGLN1P1-201ENST00000531623 762 ntBASIC25.48■■□□□ 1.67
MSH5O43196 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.48■■□□□ 1.67
MSH5O43196 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.48■■□□□ 1.67
MSH5O43196 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MSH5O43196 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.48■■□□□ 1.67
MSH5O43196 AP000484.1-201ENST00000620067 1252 ntBASIC25.48■■□□□ 1.67
MSH5O43196 AC120349.3-201ENST00000624377 529 ntBASIC25.48■■□□□ 1.67
MSH5O43196 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
MSH5O43196 AC007225.1-201ENST00000566331 1836 ntBASIC25.48■■□□□ 1.67
MSH5O43196 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
MSH5O43196 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
MSH5O43196 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.48■■□□□ 1.67
MSH5O43196 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.48■■□□□ 1.67
MSH5O43196 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.47■■□□□ 1.67
MSH5O43196 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 GCNT6-201ENST00000379591 934 ntBASIC25.47■■□□□ 1.67
MSH5O43196 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
MSH5O43196 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
MSH5O43196 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
MSH5O43196 AC063952.2-201ENST00000498792 1227 ntBASIC25.47■■□□□ 1.67
MSH5O43196 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
MSH5O43196 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC25.47■■□□□ 1.67
MSH5O43196 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.47■■□□□ 1.67
MSH5O43196 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MSH5O43196 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.47■■□□□ 1.67
MSH5O43196 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 CCNT2P1-201ENST00000423082 1315 ntBASIC25.46■■□□□ 1.67
MSH5O43196 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.46■■□□□ 1.67
MSH5O43196 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
MSH5O43196 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 AC040904.1-201ENST00000590850 223 ntBASIC25.46■■□□□ 1.67
MSH5O43196 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 AC090246.1-201ENST00000616499 426 ntBASIC25.46■■□□□ 1.67
MSH5O43196 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
MSH5O43196 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSH5O43196 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.45■■□□□ 1.67
MSH5O43196 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
MSH5O43196 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
MSH5O43196 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MSH5O43196 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MSH5O43196 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
MSH5O43196 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
MSH5O43196 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MSH5O43196 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
MSH5O43196 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC25.45■■□□□ 1.66
MSH5O43196 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.45■■□□□ 1.66
MSH5O43196 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
MSH5O43196 AC128688.1-201ENST00000487626 519 ntBASIC25.45■■□□□ 1.66
MSH5O43196 AC016550.1-201ENST00000505348 785 ntBASIC25.45■■□□□ 1.66
MSH5O43196 RN7SKP253-201ENST00000516424 309 ntBASIC25.45■■□□□ 1.66
MSH5O43196 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC25.45■■□□□ 1.66
MSH5O43196 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms