Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SPTLC1O15269 GCSHP2-201ENST00000560971 527 ntBASIC20.14■□□□□ 0.81
SPTLC1O15269 NEK4P2-201ENST00000580004 1012 ntBASIC20.14■□□□□ 0.81
SPTLC1O15269 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SPTLC1O15269 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SPTLC1O15269 AC140113.3-201ENST00000605663 199 ntBASIC20.14■□□□□ 0.81
SPTLC1O15269 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.14■□□□□ 0.81
SPTLC1O15269 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.14■□□□□ 0.81
SPTLC1O15269 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTLC1O15269 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTLC1O15269 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SPTLC1O15269 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SPTLC1O15269 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.14■□□□□ 0.81
SPTLC1O15269 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPTLC1O15269 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.13■□□□□ 0.81
SPTLC1O15269 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 KRT126P-201ENST00000549467 1181 ntBASIC20.13■□□□□ 0.81
SPTLC1O15269 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 MIR3180-5-201ENST00000583743 153 ntBASIC20.13■□□□□ 0.81
SPTLC1O15269 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.13■□□□□ 0.81
SPTLC1O15269 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SPTLC1O15269 MYC-208ENST00000641036 567 ntBASIC20.13■□□□□ 0.81
SPTLC1O15269 AL031432.5-201ENST00000641059 760 ntBASIC20.13■□□□□ 0.81
SPTLC1O15269 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.13■□□□□ 0.81
SPTLC1O15269 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTLC1O15269 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTLC1O15269 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTLC1O15269 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPTLC1O15269 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.12■□□□□ 0.81
SPTLC1O15269 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.12■□□□□ 0.81
SPTLC1O15269 KRT18P38-201ENST00000449496 1282 ntBASIC20.12■□□□□ 0.81
SPTLC1O15269 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTLC1O15269 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTLC1O15269 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.12■□□□□ 0.81
SPTLC1O15269 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SPTLC1O15269 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTLC1O15269 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTLC1O15269 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 AL109659.2-201ENST00000606809 1674 ntBASIC20.12■□□□□ 0.81
SPTLC1O15269 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTLC1O15269 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.11■□□□□ 0.81
SPTLC1O15269 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.11■□□□□ 0.81
SPTLC1O15269 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 AL358472.4-201ENST00000633140 710 ntBASIC20.11■□□□□ 0.81
SPTLC1O15269 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTLC1O15269 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTLC1O15269 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms