Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD9O15198 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 SLC25A1P4-201ENST00000567977 778 ntBASIC17.09■□□□□ 0.33
SMAD9O15198 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD9O15198 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD9O15198 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMAD9O15198 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD9O15198 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD9O15198 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD9O15198 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD9O15198 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.08■□□□□ 0.33
SMAD9O15198 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD9O15198 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMAD9O15198 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMAD9O15198 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD9O15198 AC096733.2-201ENST00000609937 1394 ntBASIC17.08■□□□□ 0.32
SMAD9O15198 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMAD9O15198 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD9O15198 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.08■□□□□ 0.32
SMAD9O15198 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 AC097488.1-201ENST00000507834 756 ntBASIC17.08■□□□□ 0.32
SMAD9O15198 BX088651.1-201ENST00000540551 451 ntBASIC17.08■□□□□ 0.32
SMAD9O15198 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.08■□□□□ 0.32
SMAD9O15198 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SMAD9O15198 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD9O15198 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 NEFHP1-201ENST00000412845 2629 ntBASIC17.08■□□□□ 0.32
SMAD9O15198 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.08■□□□□ 0.32
SMAD9O15198 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMAD9O15198 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMAD9O15198 AC141586.3-201ENST00000562166 1838 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 BX323043.1-201ENST00000641006 1765 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMAD9O15198 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMAD9O15198 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.07■□□□□ 0.32
SMAD9O15198 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.07■□□□□ 0.32
SMAD9O15198 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SMAD9O15198 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 CRYGFP-201ENST00000418459 633 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 AL390955.1-201ENST00000428694 934 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 PRSS44-201ENST00000515154 1146 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.07■□□□□ 0.32
SMAD9O15198 CKBP1-201ENST00000565489 1086 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 AP005242.2-201ENST00000580065 1175 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms