Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC006557.6-201ENST00000623071 864 ntBASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AL133373.2-201ENST00000623187 2828 ntBASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AC093525.10-201ENST00000625130 1569 ntBASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 KRT8P8-201ENST00000434750 1448 ntBASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV13-1A0A0B4J241 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 AC004911.1-201ENST00000416316 871 ntBASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 RPS2P52-201ENST00000469610 820 ntBASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 AF201337.1-201ENST00000520239 748 ntBASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 AC133552.2-202ENST00000575694 574 ntBASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV13-1A0A0B4J241 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms