Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 AC026436.1-201ENST00000510537 270 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR3925-201ENST00000584674 77 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 AL353770.2-201ENST00000620024 78 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR548AH-201ENST00000637109 76 ntBASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
KRTAP4-11Q9BYQ6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU4-45P-201ENST00000365469 141 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR489-201ENST00000384923 84 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR93-201ENST00000385024 80 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD12-201ENST00000391002 90 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD18.2-201ENST00000459604 70 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNA5SP208-201ENST00000516156 78 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD53-201ENST00000579969 78 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 AL591424.2-201ENST00000617023 128 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD19B.1-201ENST00000630615 80 ntBASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
KRTAP4-11Q9BYQ6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA9.2-201ENST00000365361 133 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA7.4-201ENST00000384249 137 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA3.2-201ENST00000408221 125 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR1289-2-201ENST00000408360 111 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA70.22-201ENST00000517160 124 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 AL353997.5-201ENST00000618886 171 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 SMCR2_2.1-201ENST00000619783 161 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR7154-201ENST00000620673 73 ntBASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-11Q9BYQ6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU1-15P-201ENST00000353977 144 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNA5SP276-201ENST00000362580 94 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA71.1-201ENST00000364523 117 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU6-455P-201ENST00000384681 107 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR196B-201ENST00000384852 84 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR2114-201ENST00000516645 80 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR4658-201ENST00000584344 65 ntBASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-11Q9BYQ6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA67.5-201ENST00000391036 107 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 AC006989.1-201ENST00000427212 131 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU6-1161P-201ENST00000516176 102 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU6-579P-201ENST00000516879 102 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 AC012531.5-201ENST00000611375 151 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR622-201ENST00000638396 96 ntBASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-11Q9BYQ6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNU6-226P-201ENST00000363778 107 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR520E-201ENST00000384867 87 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD109B-201ENST00000458961 67 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD109A-201ENST00000459128 67 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 AC079600.2-201ENST00000550076 130 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR4498-201ENST00000577599 66 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR4648-201ENST00000580107 72 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MIR4713-201ENST00000582691 75 ntBASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-11Q9BYQ6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORD56B-201ENST00000384713 71 ntBASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 Z98941.1-201ENST00000407764 100 ntBASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 RNA5SP492-201ENST00000411330 114 ntBASIC0.84□□□□□ -2.27
KRTAP4-11Q9BYQ6 SNORA13-201ENST00000458790 133 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms