Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR3145-201ENST00000580727 82 ntBASIC-5.02□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.217-201ENST00000364214 105 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 RNU6-879P-201ENST00000364328 108 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.641-201ENST00000459414 105 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 MTCO2P29-201ENST00000465212 189 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 RNU6-1299P-201ENST00000516316 100 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.773-201ENST00000607168 90 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 AC007485.1-201ENST00000616755 206 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 UBE2WP1-201ENST00000362030 340 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.405-201ENST00000383979 100 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.451-201ENST00000384200 100 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.524-201ENST00000384564 100 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 RNU6-1060P-201ENST00000384664 107 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.561-201ENST00000384694 100 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 AL450471.1-201ENST00000447509 127 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 RNU7-167P-201ENST00000459160 62 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 RNU7-6P-201ENST00000516845 62 ntBASIC-5.03□□□□□ -3.21
VPS13AQ96RL7 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.04□□□□□ -3.22
VPS13AQ96RL7 SNORD65C-201ENST00000390962 71 ntBASIC-5.04□□□□□ -3.22
VPS13AQ96RL7 RNU7-140P-201ENST00000459546 60 ntBASIC-5.04□□□□□ -3.22
VPS13AQ96RL7 RNU6-308P-201ENST00000390957 107 ntBASIC-5.05□□□□□ -3.22
VPS13AQ96RL7 RNU6-1028P-201ENST00000517164 93 ntBASIC-5.05□□□□□ -3.22
VPS13AQ96RL7 RNU5B-1-201ENST00000363286 116 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 SNORD77.2-201ENST00000391045 68 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 RNU4-90P-201ENST00000362773 141 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 SNORD45.1-201ENST00000363181 77 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 Y_RNA.202-201ENST00000364083 110 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 Y_RNA.557-201ENST00000384680 107 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 RNU6-248P-201ENST00000410720 107 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 AL442128.1-201ENST00000615151 90 ntBASIC-5.06□□□□□ -3.22
VPS13AQ96RL7 Y_RNA.192-201ENST00000363977 102 ntBASIC-5.07□□□□□ -3.22
VPS13AQ96RL7 RNU6-790P-201ENST00000384479 105 ntBASIC-5.07□□□□□ -3.22
VPS13AQ96RL7 RNU6-1338P-201ENST00000516328 91 ntBASIC-5.07□□□□□ -3.22
VPS13AQ96RL7 RNU6-789P-201ENST00000517105 102 ntBASIC-5.07□□□□□ -3.22
VPS13AQ96RL7 AC100814.1-201ENST00000606963 623 ntBASIC-5.07□□□□□ -3.22
VPS13AQ96RL7 RNU4-40P-201ENST00000364351 143 ntBASIC-5.08□□□□□ -3.22
VPS13AQ96RL7 SNORA18.6-201ENST00000516792 115 ntBASIC-5.09□□□□□ -3.22
VPS13AQ96RL7 RNY4P19-201ENST00000362530 96 ntBASIC-5.09□□□□□ -3.22
VPS13AQ96RL7 AC022079.1-201ENST00000621546 602 ntBASIC-5.09□□□□□ -3.22
VPS13AQ96RL7 RNU6-92P-201ENST00000605893 104 ntBASIC-5.1□□□□□ -3.23
VPS13AQ96RL7 RNU6-419P-201ENST00000517030 63 ntBASIC-5.1□□□□□ -3.23
VPS13AQ96RL7 Y_RNA.106-201ENST00000363189 100 ntBASIC-5.11□□□□□ -3.23
VPS13AQ96RL7 RNU6-201P-201ENST00000517100 61 ntBASIC-5.11□□□□□ -3.23
VPS13AQ96RL7 AC139792.2-201ENST00000624218 587 ntBASIC-5.11□□□□□ -3.23
VPS13AQ96RL7 RNU6-182P-201ENST00000516970 105 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 Y_RNA.264-201ENST00000364665 102 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 AC013791.1-201ENST00000616619 62 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 MIR3675-201ENST00000583661 73 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 AC018645.2-201ENST00000609151 472 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 SEPT14P19-203ENST00000633205 211 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 MIR3658-201ENST00000636291 56 ntBASIC-5.12□□□□□ -3.23
VPS13AQ96RL7 TMSB4XP3-201ENST00000445144 114 ntBASIC-5.13□□□□□ -3.23
VPS13AQ96RL7 AC073114.1-201ENST00000612027 490 ntBASIC-5.13□□□□□ -3.23
VPS13AQ96RL7 RNU6-409P-201ENST00000384114 104 ntBASIC-5.14□□□□□ -3.23
VPS13AQ96RL7 RNU7-87P-201ENST00000459343 62 ntBASIC-5.14□□□□□ -3.23
VPS13AQ96RL7 MIR1255B1-201ENST00000636325 63 ntBASIC-5.14□□□□□ -3.23
VPS13AQ96RL7 RNU6-769P-201ENST00000384407 104 ntBASIC-5.14□□□□□ -3.23
VPS13AQ96RL7 SNORD27.1-201ENST00000516319 72 ntBASIC-5.15□□□□□ -3.23
VPS13AQ96RL7 RNU6-604P-201ENST00000390917 100 ntBASIC-5.15□□□□□ -3.23
VPS13AQ96RL7 RNU6-1038P-201ENST00000516516 104 ntBASIC-5.15□□□□□ -3.23
VPS13AQ96RL7 Y_RNA.163-201ENST00000363702 113 ntBASIC-5.16□□□□□ -3.23
VPS13AQ96RL7 RNU6-501P-201ENST00000364072 100 ntBASIC-5.16□□□□□ -3.23
VPS13AQ96RL7 AC021753.1-201ENST00000635724 168 ntBASIC-5.16□□□□□ -3.23
VPS13AQ96RL7 SNORD56.4-201ENST00000363883 71 ntBASIC-5.16□□□□□ -3.24
VPS13AQ96RL7 Y_RNA.705-201ENST00000516862 110 ntBASIC-5.16□□□□□ -3.24
VPS13AQ96RL7 MIR759-201ENST00000390224 91 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 Y_RNA.605-201ENST00000410577 105 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 RNU7-119P-201ENST00000459279 63 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 RNU7-110P-201ENST00000516891 62 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 RNU6-363P-201ENST00000362895 105 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 Y_RNA.301-201ENST00000364990 103 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 RNU6-231P-201ENST00000517122 103 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 AC090574.1-201ENST00000623186 233 ntBASIC-5.17□□□□□ -3.24
VPS13AQ96RL7 RNU6-979P-201ENST00000383896 107 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 AC025253.1-201ENST00000613623 543 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 RNU6-99P-201ENST00000364721 107 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 RNA5SP236-201ENST00000516169 116 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 Y_RNA.402-201ENST00000383972 102 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 RNU6-240P-201ENST00000516098 97 ntBASIC-5.18□□□□□ -3.24
VPS13AQ96RL7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-5.19□□□□□ -3.24
VPS13AQ96RL7 RNU6-595P-201ENST00000363944 107 ntBASIC-5.19□□□□□ -3.24
VPS13AQ96RL7 RNU6-1248P-201ENST00000391096 64 ntBASIC-5.19□□□□□ -3.24
VPS13AQ96RL7 RNU6-507P-201ENST00000516045 100 ntBASIC-5.19□□□□□ -3.24
VPS13AQ96RL7 RNU6-1009P-201ENST00000390996 107 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 SNORA40.16-201ENST00000517238 121 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 RNU6-224P-201ENST00000384055 107 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 RNU6-644P-201ENST00000391155 98 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 RNU2-72P-201ENST00000411175 163 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 RNU6-764P-201ENST00000516396 105 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 AC006006.1-201ENST00000603082 144 ntBASIC-5.2□□□□□ -3.24
VPS13AQ96RL7 RNU4-1-201ENST00000363925 141 ntBASIC-5.21□□□□□ -3.24
VPS13AQ96RL7 RNU6-542P-201ENST00000516405 103 ntBASIC-5.22□□□□□ -3.24
VPS13AQ96RL7 SNORD60.1-201ENST00000362451 73 ntBASIC-5.22□□□□□ -3.25
VPS13AQ96RL7 Y_RNA.77-201ENST00000362962 107 ntBASIC-5.22□□□□□ -3.25
VPS13AQ96RL7 Y_RNA.230-201ENST00000364348 109 ntBASIC-5.22□□□□□ -3.25
VPS13AQ96RL7 RNU6-196P-201ENST00000384315 107 ntBASIC-5.22□□□□□ -3.25
VPS13AQ96RL7 AL050303.3-201ENST00000613704 284 ntBASIC-5.22□□□□□ -3.25
VPS13AQ96RL7 RNU6-903P-201ENST00000391270 109 ntBASIC-5.23□□□□□ -3.25
VPS13AQ96RL7 MIR526A2-201ENST00000390198 65 ntBASIC-5.24□□□□□ -3.25
Retrieved 100 of 98,524 protein–RNA pairs in 854.3 ms