Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 AC009487.2-201ENST00000420969 6821 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 RNA5SP274-201ENST00000410484 108 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 MIR4713-201ENST00000582691 75 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 MIR7106-201ENST00000612419 65 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 7SK.11-201ENST00000615477 250 ntBASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CHIC1Q5VXU3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 MIR302D-201ENST00000362275 68 ntBASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 MIR644A-201ENST00000385262 94 ntBASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 RNU6-469P-201ENST00000516253 101 ntBASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 RNU7-151P-201ENST00000516930 53 ntBASIC4.94□□□□□ -1.62
CHIC1Q5VXU3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHIC1Q5VXU3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHIC1Q5VXU3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHIC1Q5VXU3 MIR5047-201ENST00000579212 100 ntBASIC4.93□□□□□ -1.62
CHIC1Q5VXU3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHIC1Q5VXU3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHIC1Q5VXU3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.92□□□□□ -1.62
CHIC1Q5VXU3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHIC1Q5VXU3 AL512310.8-201ENST00000550183 120 ntBASIC4.91□□□□□ -1.62
CHIC1Q5VXU3 MIR3186-201ENST00000577404 85 ntBASIC4.91□□□□□ -1.62
CHIC1Q5VXU3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.91□□□□□ -1.62
CHIC1Q5VXU3 RNA5SP484-201ENST00000458857 111 ntBASIC4.9□□□□□ -1.63
CHIC1Q5VXU3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.9□□□□□ -1.63
CHIC1Q5VXU3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.9□□□□□ -1.63
CHIC1Q5VXU3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.89□□□□□ -1.63
CHIC1Q5VXU3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHIC1Q5VXU3 MIR516B1-201ENST00000385211 90 ntBASIC4.89□□□□□ -1.63
CHIC1Q5VXU3 RNU6-726P-201ENST00000364680 107 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 Y_RNA.407-201ENST00000383986 113 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RNU6-301P-201ENST00000384277 107 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RNU7-21P-201ENST00000459430 62 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RN7SL429P-201ENST00000479090 223 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RN7SL489P-201ENST00000486185 223 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RN7SL327P-201ENST00000488659 223 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 RN7SL853P-201ENST00000617250 223 ntBASIC4.88□□□□□ -1.63
CHIC1Q5VXU3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 RNU6-458P-201ENST00000384179 107 ntBASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 AC079600.2-201ENST00000550076 130 ntBASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 U6.58-201ENST00000613107 107 ntBASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHIC1Q5VXU3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHIC1Q5VXU3 MIR449A-201ENST00000362113 91 ntBASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 Y_RNA.363-201ENST00000365529 113 ntBASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 RNU7-90P-201ENST00000459216 62 ntBASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 AC012493.3-201ENST00000604494 112 ntBASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 AC243829.3-201ENST00000622177 108 ntBASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHIC1Q5VXU3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 RNU6-828P-201ENST00000364876 107 ntBASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 SNORA9.2-201ENST00000365361 133 ntBASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 RNU6-716P-201ENST00000365621 103 ntBASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 SNORA8.2-201ENST00000384372 139 ntBASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 EEF1A1P41-201ENST00000414667 207 ntBASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHIC1Q5VXU3 RNU6-945P-201ENST00000383947 107 ntBASIC4.83□□□□□ -1.64
CHIC1Q5VXU3 SNORA80D-201ENST00000384488 135 ntBASIC4.83□□□□□ -1.64
CHIC1Q5VXU3 RNA5SP380-201ENST00000517190 98 ntBASIC4.83□□□□□ -1.64
CHIC1Q5VXU3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHIC1Q5VXU3 SNORD23.1-201ENST00000408212 104 ntBASIC4.82□□□□□ -1.64
CHIC1Q5VXU3 RN7SKP88-201ENST00000516847 250 ntBASIC4.82□□□□□ -1.64
CHIC1Q5VXU3 7SK.8-201ENST00000612110 250 ntBASIC4.82□□□□□ -1.64
CHIC1Q5VXU3 7SK.13-201ENST00000622040 250 ntBASIC4.82□□□□□ -1.64
CHIC1Q5VXU3 MIR934-201ENST00000401241 83 ntBASIC4.81□□□□□ -1.64
CHIC1Q5VXU3 AC002350.1-201ENST00000490759 375 ntBASIC4.81□□□□□ -1.64
CHIC1Q5VXU3 MIR4287-201ENST00000579398 78 ntBASIC4.81□□□□□ -1.64
CHIC1Q5VXU3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHIC1Q5VXU3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHIC1Q5VXU3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHIC1Q5VXU3 VTRNA1-1-201ENST00000363120 99 ntBASIC4.8□□□□□ -1.64
CHIC1Q5VXU3 RNA5SP492-201ENST00000411330 114 ntBASIC4.8□□□□□ -1.64
CHIC1Q5VXU3 AC243829.6-201ENST00000612652 106 ntBASIC4.8□□□□□ -1.64
CHIC1Q5VXU3 MIR512-1-201ENST00000384913 84 ntBASIC4.79□□□□□ -1.64
CHIC1Q5VXU3 RNA5SP402-201ENST00000517148 110 ntBASIC4.79□□□□□ -1.64
CHIC1Q5VXU3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC4.79□□□□□ -1.64
CHIC1Q5VXU3 RMST_2.1-201ENST00000617263 136 ntBASIC4.79□□□□□ -1.64
CHIC1Q5VXU3 U2.18-201ENST00000622185 84 ntBASIC4.79□□□□□ -1.64
CHIC1Q5VXU3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHIC1Q5VXU3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 RNU1-112P-201ENST00000364401 164 ntBASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 RNU6-851P-201ENST00000384565 107 ntBASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 MIR4672-201ENST00000583126 81 ntBASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 AC093010.3-201ENST00000570269 15214 ntBASIC4.77□□□□□ -1.65
CHIC1Q5VXU3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.76□□□□□ -1.65
CHIC1Q5VXU3 MIR548AE1-201ENST00000583292 70 ntBASIC4.76□□□□□ -1.65
CHIC1Q5VXU3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHIC1Q5VXU3 RNU6-598P-201ENST00000364017 105 ntBASIC4.75□□□□□ -1.65
CHIC1Q5VXU3 MIR1827-201ENST00000408549 66 ntBASIC4.75□□□□□ -1.65
CHIC1Q5VXU3 SNORA44.1-201ENST00000517031 108 ntBASIC4.75□□□□□ -1.65
CHIC1Q5VXU3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHIC1Q5VXU3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHIC1Q5VXU3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHIC1Q5VXU3 RNU6-133P-201ENST00000383989 107 ntBASIC4.73□□□□□ -1.65
CHIC1Q5VXU3 MIR548H4-201ENST00000408689 111 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms