Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXD11P31277 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.62□□□□□ -1.83
HOXD11P31277 MIR4804-201ENST00000581683 73 ntBASIC3.62□□□□□ -1.83
HOXD11P31277 AC046143.2-201ENST00000609789 160 ntBASIC3.62□□□□□ -1.83
HOXD11P31277 AC080100.1-201ENST00000624239 5356 ntBASIC3.62□□□□□ -1.83
HOXD11P31277 RNU6-1246P-201ENST00000391064 107 ntBASIC3.61□□□□□ -1.83
HOXD11P31277 SNORA31.2-201ENST00000516019 134 ntBASIC3.61□□□□□ -1.83
HOXD11P31277 AL359821.1-201ENST00000605519 182 ntBASIC3.61□□□□□ -1.83
HOXD11P31277 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD11P31277 Y_RNA.355-201ENST00000365462 98 ntBASIC3.6□□□□□ -1.83
HOXD11P31277 SNORA6-201ENST00000384033 151 ntBASIC3.6□□□□□ -1.83
HOXD11P31277 MIR548L-201ENST00000408303 86 ntBASIC3.6□□□□□ -1.83
HOXD11P31277 RNU7-143P-201ENST00000516781 65 ntBASIC3.6□□□□□ -1.83
HOXD11P31277 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC3.6□□□□□ -1.83
HOXD11P31277 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD11P31277 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HOXD11P31277 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HOXD11P31277 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD11P31277 MIR758-201ENST00000390227 88 ntBASIC3.59□□□□□ -1.83
HOXD11P31277 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXD11P31277 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXD11P31277 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD11P31277 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD11P31277 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD11P31277 SNORD28-201ENST00000384706 75 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 MIR527-201ENST00000385244 85 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 SNORD17-201ENST00000390930 237 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 RNU7-56P-201ENST00000458744 62 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 Y_RNA.633-201ENST00000459107 95 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 AC092185.1-201ENST00000491371 97 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 MIR8063-201ENST00000621930 81 ntBASIC3.58□□□□□ -1.84
HOXD11P31277 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD11P31277 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD11P31277 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD11P31277 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD11P31277 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD11P31277 Y_RNA.74-201ENST00000362911 99 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 MIR199A2-201ENST00000385289 110 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 RNU6-269P-201ENST00000391077 97 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD11P31277 RNU4-47P-201ENST00000410876 114 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 RNU6-419P-201ENST00000517030 63 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 SNORA31.25-201ENST00000517242 134 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 AC023827.1-201ENST00000569247 97 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 SNORA77B-201ENST00000578179 125 ntBASIC3.57□□□□□ -1.84
HOXD11P31277 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXD11P31277 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD11P31277 RNU5B-6P-201ENST00000516765 68 ntBASIC3.56□□□□□ -1.84
HOXD11P31277 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HOXD11P31277 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HOXD11P31277 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXD11P31277 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD11P31277 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD11P31277 SNORD56.5-201ENST00000364281 72 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 SNORA63.6-201ENST00000364921 119 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 MIR764-201ENST00000390811 85 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 RNA5SP212-201ENST00000391223 107 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 AL136317.1-201ENST00000612653 226 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 AL773524.1-201ENST00000614065 229 ntBASIC3.54□□□□□ -1.84
HOXD11P31277 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD11P31277 MIR489-201ENST00000384923 84 ntBASIC3.53□□□□□ -1.84
HOXD11P31277 MIR100-201ENST00000385259 80 ntBASIC3.53□□□□□ -1.84
HOXD11P31277 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXD11P31277 RNA5SP184-201ENST00000411071 108 ntBASIC3.53□□□□□ -1.84
HOXD11P31277 AL021921.1-201ENST00000442774 93 ntBASIC3.53□□□□□ -1.84
HOXD11P31277 RNA5SP458-201ENST00000516188 119 ntBASIC3.53□□□□□ -1.84
HOXD11P31277 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD11P31277 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD11P31277 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HOXD11P31277 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD11P31277 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD11P31277 RNU1-141P-201ENST00000364623 158 ntBASIC3.52□□□□□ -1.85
HOXD11P31277 SNORD41.1-201ENST00000391000 69 ntBASIC3.52□□□□□ -1.85
HOXD11P31277 RNU6-172P-201ENST00000411000 93 ntBASIC3.52□□□□□ -1.85
HOXD11P31277 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
HOXD11P31277 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HOXD11P31277 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD11P31277 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD11P31277 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD11P31277 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD11P31277 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD11P31277 SNORD67-201ENST00000390833 111 ntBASIC3.51□□□□□ -1.85
HOXD11P31277 AL591806.2-201ENST00000433122 173 ntBASIC3.51□□□□□ -1.85
HOXD11P31277 MIR8074-201ENST00000615081 81 ntBASIC3.51□□□□□ -1.85
HOXD11P31277 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD11P31277 RNU6-986P-201ENST00000363133 102 ntBASIC3.5□□□□□ -1.85
HOXD11P31277 AC022018.1-201ENST00000430685 241 ntBASIC3.5□□□□□ -1.85
HOXD11P31277 MIR4319-201ENST00000577285 85 ntBASIC3.5□□□□□ -1.85
HOXD11P31277 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
HOXD11P31277 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HOXD11P31277 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HOXD11P31277 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD11P31277 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD11P31277 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXD11P31277 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD11P31277 Y_RNA.338-201ENST00000365320 114 ntBASIC3.49□□□□□ -1.85
HOXD11P31277 CYP3A54P-201ENST00000566950 75 ntBASIC3.49□□□□□ -1.85
HOXD11P31277 AC093908.1-201ENST00000623125 8092 ntBASIC3.49□□□□□ -1.85
HOXD11P31277 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms