Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MS4A3Q96HJ5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MS4A3Q96HJ5 MIR519E-201ENST00000385075 84 ntBASIC2.95□□□□□ -1.94
MS4A3Q96HJ5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 MIR545-201ENST00000385085 106 ntBASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 RNA5SP270-201ENST00000411361 118 ntBASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 AC245166.1-201ENST00000521012 253 ntBASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 MIR7975-201ENST00000619350 68 ntBASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
MS4A3Q96HJ5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 SNORA63.1-201ENST00000362493 131 ntBASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 RNU6-364P-201ENST00000384387 107 ntBASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 SNORA31.11-201ENST00000516528 139 ntBASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 U2.7-201ENST00000619197 100 ntBASIC2.93□□□□□ -1.94
MS4A3Q96HJ5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 SNORD115-24-201ENST00000363528 82 ntBASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 SNORD113.3-201ENST00000364630 78 ntBASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 MIR4276-201ENST00000584832 70 ntBASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 ZNF355P-201ENST00000427301 3216 ntBASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MS4A3Q96HJ5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MS4A3Q96HJ5 RNVU1-14-201ENST00000384770 164 ntBASIC2.91□□□□□ -1.94
MS4A3Q96HJ5 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
MS4A3Q96HJ5 MIR548X-201ENST00000580069 75 ntBASIC2.91□□□□□ -1.94
MS4A3Q96HJ5 MIR4635-201ENST00000583759 79 ntBASIC2.91□□□□□ -1.94
MS4A3Q96HJ5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
MS4A3Q96HJ5 RNU6-838P-201ENST00000363399 108 ntBASIC2.9□□□□□ -1.95
MS4A3Q96HJ5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.9□□□□□ -1.95
MS4A3Q96HJ5 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
MS4A3Q96HJ5 RNU7-161P-201ENST00000517289 62 ntBASIC2.9□□□□□ -1.95
MS4A3Q96HJ5 RNU1-41P-201ENST00000516161 162 ntBASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 RNU1-48P-201ENST00000516400 162 ntBASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 MIR3944-201ENST00000581277 108 ntBASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 MIR4676-201ENST00000583078 72 ntBASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
MS4A3Q96HJ5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 MIR208A-201ENST00000362287 71 ntBASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 MIR34B-201ENST00000385076 84 ntBASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 MIR938-201ENST00000401216 83 ntBASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
MS4A3Q96HJ5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 SNORD46.1-201ENST00000364139 104 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 SNORA41B-201ENST00000384785 128 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 RPS26P5-201ENST00000418544 335 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 AC005326.1-201ENST00000429197 123 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 RNU7-74P-201ENST00000459104 62 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 AC091153.1-201ENST00000466297 402 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 MIR3664-201ENST00000579074 99 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 AC027335.2-201ENST00000624030 375 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
MS4A3Q96HJ5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
MS4A3Q96HJ5 RNU7-102P-201ENST00000458948 62 ntBASIC2.86□□□□□ -1.95
MS4A3Q96HJ5 RNU7-104P-201ENST00000459398 79 ntBASIC2.86□□□□□ -1.95
MS4A3Q96HJ5 uc_338.1-201ENST00000612113 180 ntBASIC2.86□□□□□ -1.95
MS4A3Q96HJ5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MS4A3Q96HJ5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MS4A3Q96HJ5 Y_RNA.174-201ENST00000363781 105 ntBASIC2.85□□□□□ -1.95
MS4A3Q96HJ5 SNORD114-4-201ENST00000363962 75 ntBASIC2.85□□□□□ -1.95
MS4A3Q96HJ5 RNA5SP120-201ENST00000410900 112 ntBASIC2.85□□□□□ -1.95
MS4A3Q96HJ5 SNORA40.16-201ENST00000517238 121 ntBASIC2.85□□□□□ -1.95
MS4A3Q96HJ5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 SNORD116.2-201ENST00000391251 93 ntBASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 AC036111.3-201ENST00000526389 112 ntBASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 MIR4529-201ENST00000578110 78 ntBASIC2.84□□□□□ -1.95
MS4A3Q96HJ5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.84□□□□□ -1.96
MS4A3Q96HJ5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 Y_RNA.32-201ENST00000362589 110 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 SNORA70.4-201ENST00000365509 134 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 MT-TY-201ENST00000387409 66 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 AC115115.1-201ENST00000449927 248 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 SNORA31.14-201ENST00000516728 116 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 MIR4658-201ENST00000584344 65 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 MIR7112-201ENST00000616126 65 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 uc_338.16-201ENST00000621804 95 ntBASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MS4A3Q96HJ5 SNORA15B-2-201ENST00000384058 135 ntBASIC2.82□□□□□ -1.96
MS4A3Q96HJ5 SNORA15B-1-201ENST00000384334 135 ntBASIC2.82□□□□□ -1.96
MS4A3Q96HJ5 SNORA67.3-201ENST00000384366 140 ntBASIC2.82□□□□□ -1.96
MS4A3Q96HJ5 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
MS4A3Q96HJ5 RNU6-1250P-201ENST00000391218 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms