Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC034229.5-201ENST00000624258 185 ntBASIC3.34□□□□□ -1.87
CD44P16070 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
CD44P16070 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD44P16070 RNA5SP95-201ENST00000410319 137 ntBASIC3.33□□□□□ -1.88
CD44P16070 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
CD44P16070 RNA5SP120-201ENST00000410900 112 ntBASIC3.33□□□□□ -1.88
CD44P16070 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
CD44P16070 MIR4444-1-201ENST00000581696 74 ntBASIC3.33□□□□□ -1.88
CD44P16070 MIR4444-2-201ENST00000584390 74 ntBASIC3.33□□□□□ -1.88
CD44P16070 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CD44P16070 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD44P16070 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
CD44P16070 RNVU1-14-201ENST00000384770 164 ntBASIC3.32□□□□□ -1.88
CD44P16070 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
CD44P16070 snoU13.25-201ENST00000458945 104 ntBASIC3.32□□□□□ -1.88
CD44P16070 AC003982.1-202ENST00000469928 248 ntBASIC3.32□□□□□ -1.88
CD44P16070 RNU6-231P-201ENST00000517122 103 ntBASIC3.32□□□□□ -1.88
CD44P16070 MIR548X-201ENST00000580069 75 ntBASIC3.32□□□□□ -1.88
CD44P16070 MIR548AG2-201ENST00000581228 64 ntBASIC3.32□□□□□ -1.88
CD44P16070 U4.4-201ENST00000620626 117 ntBASIC3.32□□□□□ -1.88
CD44P16070 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CD44P16070 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD44P16070 Y_RNA.224-201ENST00000364308 111 ntBASIC3.31□□□□□ -1.88
CD44P16070 MIR194-1-201ENST00000384892 85 ntBASIC3.31□□□□□ -1.88
CD44P16070 MIR517B-201ENST00000385102 67 ntBASIC3.31□□□□□ -1.88
CD44P16070 AC004965.1-201ENST00000413033 213 ntBASIC3.31□□□□□ -1.88
CD44P16070 AC055731.1-201ENST00000474387 401 ntBASIC3.31□□□□□ -1.88
CD44P16070 SNORA31.26-201ENST00000517250 137 ntBASIC3.31□□□□□ -1.88
CD44P16070 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD44P16070 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CD44P16070 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CD44P16070 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD44P16070 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD44P16070 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD44P16070 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CD44P16070 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
CD44P16070 RNU6-1126P-201ENST00000384002 107 ntBASIC3.3□□□□□ -1.88
CD44P16070 RNU6-360P-201ENST00000390944 104 ntBASIC3.3□□□□□ -1.88
CD44P16070 AC244505.6-201ENST00000452829 130 ntBASIC3.3□□□□□ -1.88
CD44P16070 SNORD42B-201ENST00000458893 67 ntBASIC3.3□□□□□ -1.88
CD44P16070 RNU7-174P-201ENST00000516248 59 ntBASIC3.3□□□□□ -1.88
CD44P16070 RNU7-13P-201ENST00000516413 62 ntBASIC3.3□□□□□ -1.88
CD44P16070 AP003716.2-201ENST00000528260 108 ntBASIC3.3□□□□□ -1.88
CD44P16070 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.3□□□□□ -1.88
CD44P16070 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD44P16070 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD44P16070 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
CD44P16070 MIR518A2-201ENST00000384966 87 ntBASIC3.29□□□□□ -1.88
CD44P16070 MIR1185-1-201ENST00000408598 86 ntBASIC3.29□□□□□ -1.88
CD44P16070 RNU6-922P-201ENST00000516753 99 ntBASIC3.29□□□□□ -1.88
CD44P16070 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD44P16070 RNU6-990P-201ENST00000364385 104 ntBASIC3.28□□□□□ -1.88
CD44P16070 RNU1-148P-201ENST00000384472 162 ntBASIC3.28□□□□□ -1.88
CD44P16070 AL513328.1-201ENST00000446460 224 ntBASIC3.28□□□□□ -1.88
CD44P16070 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
CD44P16070 AC012531.5-201ENST00000611375 151 ntBASIC3.28□□□□□ -1.88
CD44P16070 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
CD44P16070 RNU6-535P-201ENST00000384722 107 ntBASIC3.27□□□□□ -1.89
CD44P16070 MIR4429-201ENST00000580105 73 ntBASIC3.27□□□□□ -1.89
CD44P16070 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.27□□□□□ -1.89
CD44P16070 AC008739.3-201ENST00000603262 127 ntBASIC3.27□□□□□ -1.89
CD44P16070 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD44P16070 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD44P16070 RN7SL601P-201ENST00000471221 293 ntBASIC3.26□□□□□ -1.89
CD44P16070 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
CD44P16070 SNORA40.16-201ENST00000517238 121 ntBASIC3.26□□□□□ -1.89
CD44P16070 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
CD44P16070 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.26□□□□□ -1.89
CD44P16070 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD44P16070 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CD44P16070 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.25□□□□□ -1.89
CD44P16070 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD44P16070 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD44P16070 RNU6-1162P-201ENST00000384443 104 ntBASIC3.25□□□□□ -1.89
CD44P16070 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.25□□□□□ -1.89
CD44P16070 AC021146.9-201ENST00000512503 156 ntBASIC3.25□□□□□ -1.89
CD44P16070 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD44P16070 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD44P16070 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
CD44P16070 RNA5SP259-201ENST00000365541 109 ntBASIC3.24□□□□□ -1.89
CD44P16070 SNORA41B-201ENST00000384785 128 ntBASIC3.24□□□□□ -1.89
CD44P16070 MIR670-201ENST00000390142 98 ntBASIC3.24□□□□□ -1.89
CD44P16070 RNA5SP100-201ENST00000410903 110 ntBASIC3.24□□□□□ -1.89
CD44P16070 RNA5SP59-201ENST00000410922 110 ntBASIC3.24□□□□□ -1.89
CD44P16070 snoU13.21-201ENST00000459368 105 ntBASIC3.24□□□□□ -1.89
CD44P16070 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.24□□□□□ -1.89
CD44P16070 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.24□□□□□ -1.89
CD44P16070 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.24□□□□□ -1.89
CD44P16070 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD44P16070 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.24□□□□□ -1.89
CD44P16070 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
CD44P16070 MIR521-2-201ENST00000384818 87 ntBASIC3.23□□□□□ -1.89
CD44P16070 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CD44P16070 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
CD44P16070 PRSS3P4-201ENST00000453323 162 ntBASIC3.23□□□□□ -1.89
CD44P16070 SNORA31.17-201ENST00000516953 127 ntBASIC3.23□□□□□ -1.89
CD44P16070 AC008608.1-201ENST00000603910 127 ntBASIC3.23□□□□□ -1.89
CD44P16070 AL645939.4-201ENST00000604495 135 ntBASIC3.23□□□□□ -1.89
CD44P16070 U2.7-201ENST00000619197 100 ntBASIC3.23□□□□□ -1.89
CD44P16070 AP006437.1-201ENST00000641440 3685 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms