Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 MIR3126-201ENST00000577443 74 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 MIR7975-201ENST00000619350 68 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 AL022401.1-201ENST00000619498 108 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 MIR3651-201ENST00000630427 90 ntBASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP4-11Q9BYQ6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-14P-201ENST00000362759 152 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU6-422P-201ENST00000384632 107 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RPL35AP4-201ENST00000412007 102 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RPS26P28-201ENST00000470806 348 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-95P-201ENST00000516357 160 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-128P-201ENST00000516704 160 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC113403.1-201ENST00000604910 193 ntBASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-11Q9BYQ6 Z95114.1-201ENST00000624264 14574 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC087190.4-201ENST00000574616 8334 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 NEAT1-202ENST00000501122 22743 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-59P-201ENST00000364829 162 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA62.4-201ENST00000365504 151 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA5A-201ENST00000384111 134 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR128-1-201ENST00000384921 82 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR518A2-201ENST00000384966 87 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 HMGN2P22-201ENST00000427588 175 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 RN7SL691P-201ENST00000494487 301 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 U6.97-201ENST00000636904 101 ntBASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-11Q9BYQ6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU1-51P-201ENST00000365345 176 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU6-1036P-201ENST00000383959 104 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 SNORA26.9-201ENST00000391322 122 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 AC115115.1-201ENST00000449927 248 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 AL691482.1-201ENST00000453255 87 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 RN7SL293P-201ENST00000481765 281 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNA5SP49-201ENST00000516450 115 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 RNU6-175P-201ENST00000516896 107 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR3945-201ENST00000581853 98 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 MIR3616-201ENST00000584070 92 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 U1.36-201ENST00000620684 176 ntBASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-11Q9BYQ6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-11Q9BYQ6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 290.7 ms