Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 KRT8P32-201ENST00000512863 1461 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AL353807.1-201ENST00000427475 662 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AC073195.1-201ENST00000607241 877 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AC130371.2-201ENST00000619443 611 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 FAM197Y4-202ENST00000622692 608 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 AL031985.4-201ENST00000642138 673 ntBASIC21.53■■□□□ 1.04
CLIC4Q9Y696 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLIC4Q9Y696 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 BICD1-207ENST00000551848 1962 ntBASIC21.52■■□□□ 1.04
CLIC4Q9Y696 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 KRT18P29-201ENST00000397031 1267 ntBASIC21.52■■□□□ 1.04
CLIC4Q9Y696 MESTP1-201ENST00000404287 994 ntBASIC21.52■■□□□ 1.04
CLIC4Q9Y696 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 KRT8P3-201ENST00000519669 1449 ntBASIC21.52■■□□□ 1.04
CLIC4Q9Y696 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLIC4Q9Y696 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLIC4Q9Y696 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLIC4Q9Y696 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.52■■□□□ 1.03
CLIC4Q9Y696 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CLIC4Q9Y696 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.51■■□□□ 1.03
CLIC4Q9Y696 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.51■■□□□ 1.03
CLIC4Q9Y696 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.51■■□□□ 1.03
CLIC4Q9Y696 AL390961.4-201ENST00000623958 2535 ntBASIC21.51■■□□□ 1.03
CLIC4Q9Y696 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 FAM197Y1-201ENST00000421178 764 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms