Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 KRT18P23-201ENST00000435622 1283 ntBASIC19.7■□□□□ 0.74
YIPF1Q9Y548 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
YIPF1Q9Y548 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 KRT8P32-201ENST00000512863 1461 ntBASIC19.69■□□□□ 0.74
YIPF1Q9Y548 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.69■□□□□ 0.74
YIPF1Q9Y548 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 FP475955.4-201ENST00000623131 1990 ntBASIC19.69■□□□□ 0.74
YIPF1Q9Y548 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
YIPF1Q9Y548 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 ATP5G2P1-201ENST00000433580 426 ntBASIC19.68■□□□□ 0.74
YIPF1Q9Y548 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 AL136038.4-201ENST00000603606 1261 ntBASIC19.68■□□□□ 0.74
YIPF1Q9Y548 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
YIPF1Q9Y548 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 DUSP5P1-201ENST00000441325 1139 ntBASIC19.67■□□□□ 0.74
YIPF1Q9Y548 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 KRT126P-201ENST00000549467 1181 ntBASIC19.67■□□□□ 0.74
YIPF1Q9Y548 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 HOXB1-202ENST00000577092 1414 ntBASIC19.67■□□□□ 0.74
YIPF1Q9Y548 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
YIPF1Q9Y548 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 MIR564-202ENST00000385049 94 ntBASIC19.66■□□□□ 0.74
YIPF1Q9Y548 HLA-F-220ENST00000434407 884 ntBASIC19.66■□□□□ 0.74
YIPF1Q9Y548 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.66■□□□□ 0.74
YIPF1Q9Y548 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms