Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.79■■□□□ 1.72
NINLQ9Y2I6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 AL032819.2-201ENST00000624543 2162 ntBASIC25.78■■□□□ 1.72
NINLQ9Y2I6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NINLQ9Y2I6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 AP000593.1-201ENST00000393668 712 ntBASIC25.77■■□□□ 1.72
NINLQ9Y2I6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 AC104390.1-201ENST00000555663 520 ntBASIC25.77■■□□□ 1.72
NINLQ9Y2I6 MIR3180-4-201ENST00000582223 153 ntBASIC25.77■■□□□ 1.72
NINLQ9Y2I6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.77■■□□□ 1.72
NINLQ9Y2I6 AC093484.2-201ENST00000580996 2166 ntBASIC25.77■■□□□ 1.72
NINLQ9Y2I6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 AFG3L1P-217ENST00000557444 2447 ntBASIC25.76■■□□□ 1.71
NINLQ9Y2I6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 HLA-F-220ENST00000434407 884 ntBASIC25.76■■□□□ 1.71
NINLQ9Y2I6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NINLQ9Y2I6 AC034236.2-201ENST00000606662 1610 ntBASIC25.76■■□□□ 1.71
NINLQ9Y2I6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 KRT18P23-201ENST00000435622 1283 ntBASIC25.75■■□□□ 1.71
NINLQ9Y2I6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 AC023511.2-201ENST00000618803 211 ntBASIC25.75■■□□□ 1.71
NINLQ9Y2I6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.75■■□□□ 1.71
NINLQ9Y2I6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 AL645929.1-201ENST00000420084 975 ntBASIC25.74■■□□□ 1.71
NINLQ9Y2I6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 CLEC4GP1-201ENST00000596555 870 ntBASIC25.74■■□□□ 1.71
NINLQ9Y2I6 AC069148.1-201ENST00000608741 768 ntBASIC25.74■■□□□ 1.71
NINLQ9Y2I6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NINLQ9Y2I6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms