Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FZD10-202ENST00000539839 3282 ntBASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 AL355802.2-201ENST00000402069 882 ntBASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 AC126763.1-201ENST00000552015 2118 ntBASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 AC004264.1-201ENST00000608354 794 ntBASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP2BQ9UQN3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 HCG11-201ENST00000411553 5696 ntBASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 AL133373.2-201ENST00000623187 2828 ntBASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 KRT8P41-201ENST00000533985 1514 ntBASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP2BQ9UQN3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP2BQ9UQN3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 AC090192.1-201ENST00000517740 490 ntBASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 AC233263.1-201ENST00000578059 224 ntBASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 AC069544.1-201ENST00000609399 999 ntBASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 AC092666.2-201ENST00000613287 246 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms