Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 TEX21P-204ENST00000641479 1693 ntBASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGB4Q9UN71 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 TUBB8P6-201ENST00000436895 1288 ntBASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGB4Q9UN71 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGB4Q9UN71 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 AL109923.1-201ENST00000618799 583 ntBASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB4Q9UN71 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 SOX15-203ENST00000570788 1093 ntBASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 AC008687.6-201ENST00000596318 630 ntBASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB4Q9UN71 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms