Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 KRT18P23-201ENST00000435622 1283 ntBASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 RN7SL510P-201ENST00000581311 263 ntBASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 SLC25A24-204ENST00000569674 2357 ntBASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.74■□□□□ 0.91
GTF2IRD1Q9UHL9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 HOXB1-202ENST00000577092 1414 ntBASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 TSPY22P-201ENST00000427496 604 ntBASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GTF2IRD1Q9UHL9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 AC104390.1-201ENST00000555663 520 ntBASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 AC111152.3-201ENST00000569699 673 ntBASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 RNF126P1-202ENST00000569893 925 ntBASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GTF2IRD1Q9UHL9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 AC246785.2-201ENST00000432512 513 ntBASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 NUS1P1-201ENST00000446295 882 ntBASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.71■□□□□ 0.91
GTF2IRD1Q9UHL9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms