Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIT1Q9P2V4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 HBZP1-201ENST00000354915 429 ntBASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 AC092597.1-201ENST00000487352 616 ntBASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIT1Q9P2V4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRIT1Q9P2V4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRIT1Q9P2V4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRIT1Q9P2V4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 SPDYE13P-201ENST00000445314 798 ntBASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.19■□□□□ 0.5
LRIT1Q9P2V4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms