Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 IGHGP-201ENST00000390555 1178 ntBASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CXXC1Q9P0U4 AC243591.1-201ENST00000452967 1364 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 AL162377.1-201ENST00000618844 1793 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 HOXB1-202ENST00000577092 1414 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 AC106730.1-201ENST00000566722 1090 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 LINC02084-201ENST00000606069 1096 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 AL109659.2-201ENST00000606809 1674 ntBASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CXXC1Q9P0U4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 KRT8P7-201ENST00000533003 1432 ntBASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 KRT18P67-201ENST00000432816 1264 ntBASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 AC009065.1-201ENST00000564055 1225 ntBASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 RCC2P3-201ENST00000418112 1537 ntBASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CXXC1Q9P0U4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 GUSBP12-201ENST00000513727 720 ntBASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CXXC1Q9P0U4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 MIR940-201ENST00000401276 94 ntBASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 RNPS1P1-201ENST00000507437 918 ntBASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 PMS2P7-201ENST00000506558 1336 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms