Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FAM53CQ9NYF3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 AC092850.2-201ENST00000623821 2697 ntBASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 PCDHA14-201ENST00000506751 2298 ntBASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
FAM53CQ9NYF3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 AC106886.4-201ENST00000623557 2502 ntBASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 AC233992.3-201ENST00000607491 485 ntBASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LINC00554-201ENST00000564841 3011 ntBASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FAM53CQ9NYF3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 LINC02199-201ENST00000506655 2702 ntBASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 HEIH-201ENST00000623091 1652 ntBASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 AC008556.1-201ENST00000610908 2040 ntBASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.22■□□□□ 0.67
FAM53CQ9NYF3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
FAM53CQ9NYF3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms