Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM7Q9NR12 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 NUS1P1-201ENST00000446295 882 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 EMBP1-201ENST00000458200 901 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 AP002414.4-201ENST00000589764 1148 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 AL031008.1-201ENST00000619963 541 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 AL032819.2-201ENST00000624543 2162 ntBASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM7Q9NR12 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AC141586.3-201ENST00000562166 1838 ntBASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AC007952.6-201ENST00000573168 2673 ntBASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AC003957.1-201ENST00000625108 2673 ntBASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AP000593.1-201ENST00000393668 712 ntBASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 AC104692.2-201ENST00000603054 253 ntBASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDLIM7Q9NR12 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 AC034232.1-201ENST00000506026 1064 ntBASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM7Q9NR12 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM7Q9NR12 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM7Q9NR12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM7Q9NR12 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM7Q9NR12 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PDLIM7Q9NR12 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms