Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCM1Q9NP62 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
GCM1Q9NP62 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 NAPSB-206ENST00000562112 1266 ntBASIC16.1■□□□□ 0.17
GCM1Q9NP62 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCM1Q9NP62 CYP2D8P-201ENST00000433633 1490 ntBASIC16.1■□□□□ 0.17
GCM1Q9NP62 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
GCM1Q9NP62 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 C2orf69P3-201ENST00000565542 1120 ntBASIC16.09■□□□□ 0.17
GCM1Q9NP62 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 OR6D1P-202ENST00000641007 5290 ntBASIC16.09■□□□□ 0.17
GCM1Q9NP62 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 AC087289.5-201ENST00000586076 3175 ntBASIC16.09■□□□□ 0.17
GCM1Q9NP62 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GCM1Q9NP62 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCM1Q9NP62 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms