Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RPAP3Q9H6T3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RPAP3Q9H6T3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 AC093525.10-201ENST00000625130 1569 ntBASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 FEM1AP3-201ENST00000403722 1741 ntBASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 MIR662-201ENST00000384847 95 ntBASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 AL691432.3-201ENST00000621860 400 ntBASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPAP3Q9H6T3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 IRX1P1-201ENST00000438849 1838 ntBASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 KRT8P26-201ENST00000534154 1276 ntBASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 PRELID1P1-202ENST00000567272 903 ntBASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RPAP3Q9H6T3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 AC104390.1-201ENST00000555663 520 ntBASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 AP002414.4-201ENST00000589764 1148 ntBASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 AC010240.3-201ENST00000607688 395 ntBASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 KRT8P7-201ENST00000533003 1432 ntBASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPAP3Q9H6T3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 KRT8P32-201ENST00000512863 1461 ntBASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 HOXB1-202ENST00000577092 1414 ntBASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 MIR564-202ENST00000385049 94 ntBASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.67■■□□□ 1.06
RPAP3Q9H6T3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms