Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 AP000593.1-201ENST00000393668 712 ntBASIC20.59■□□□□ 0.89
HIPK3Q9H422 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 KRT18P23-201ENST00000435622 1283 ntBASIC20.59■□□□□ 0.89
HIPK3Q9H422 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 AL353801.3-201ENST00000609898 542 ntBASIC20.59■□□□□ 0.89
HIPK3Q9H422 IGHV3-41-201ENST00000613121 348 ntBASIC20.59■□□□□ 0.89
HIPK3Q9H422 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.59■□□□□ 0.89
HIPK3Q9H422 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIPK3Q9H422 LINC00167-201ENST00000530583 1419 ntBASIC20.59■□□□□ 0.89
HIPK3Q9H422 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIPK3Q9H422 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIPK3Q9H422 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 MRPL3P1-201ENST00000400109 1033 ntBASIC20.58■□□□□ 0.89
HIPK3Q9H422 KRT16P4-201ENST00000453883 522 ntBASIC20.58■□□□□ 0.89
HIPK3Q9H422 AP003733.1-201ENST00000491725 852 ntBASIC20.58■□□□□ 0.89
HIPK3Q9H422 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 AC010240.3-201ENST00000607688 395 ntBASIC20.58■□□□□ 0.89
HIPK3Q9H422 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HIPK3Q9H422 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIPK3Q9H422 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.58■□□□□ 0.88
HIPK3Q9H422 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
HIPK3Q9H422 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIPK3Q9H422 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 KRT8P7-201ENST00000533003 1432 ntBASIC20.57■□□□□ 0.88
HIPK3Q9H422 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 AC099336.1-202ENST00000602961 463 ntBASIC20.57■□□□□ 0.88
HIPK3Q9H422 AL390719.2-201ENST00000606993 987 ntBASIC20.57■□□□□ 0.88
HIPK3Q9H422 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIPK3Q9H422 AC233702.3-201ENST00000578656 1387 ntBASIC20.57■□□□□ 0.88
HIPK3Q9H422 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.57■□□□□ 0.88
HIPK3Q9H422 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIPK3Q9H422 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIPK3Q9H422 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AC104390.1-201ENST00000555663 520 ntBASIC20.56■□□□□ 0.88
HIPK3Q9H422 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIPK3Q9H422 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIPK3Q9H422 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.56■□□□□ 0.88
HIPK3Q9H422 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HIPK3Q9H422 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIPK3Q9H422 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms