Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 NSUN5P1-202ENST00000421140 1535 ntBASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 NSUN5P2-203ENST00000457352 1529 ntBASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 RNA5SP419-201ENST00000515908 135 ntBASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 AC034236.2-201ENST00000606662 1610 ntBASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP4Q9C0A0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 AP000593.1-201ENST00000393668 712 ntBASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 TP73-AS1-207ENST00000624167 988 ntBASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.74■■□□□ 1.39
CNTNAP4Q9C0A0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 GUSBP12-201ENST00000513727 720 ntBASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 AC024563.2-201ENST00000603282 481 ntBASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.73■■□□□ 1.39
CNTNAP4Q9C0A0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AC006333.2-201ENST00000607957 2099 ntBASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AC091607.1-201ENST00000490318 1060 ntBASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AF238378.1-201ENST00000526806 358 ntBASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AC124864.1-201ENST00000623408 392 ntBASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP4Q9C0A0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.71■■□□□ 1.39
CNTNAP4Q9C0A0 KRT89P-201ENST00000620027 1478 ntBASIC23.71■■□□□ 1.39
CNTNAP4Q9C0A0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CNTNAP4Q9C0A0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms