Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC38A3Q99624 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC38A3Q99624 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC38A3Q99624 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC38A3Q99624 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SLC38A3Q99624 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
SLC38A3Q99624 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SLC38A3Q99624 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 TEX21P-204ENST00000641479 1693 ntBASIC18.26■□□□□ 0.51
SLC38A3Q99624 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 AL121956.5-201ENST00000625261 221 ntBASIC18.26■□□□□ 0.51
SLC38A3Q99624 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A3Q99624 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A3Q99624 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 AC036111.1-201ENST00000533973 1582 ntBASIC18.25■□□□□ 0.51
SLC38A3Q99624 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 MIR3180-5-201ENST00000583743 153 ntBASIC18.25■□□□□ 0.51
SLC38A3Q99624 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 AL158211.5-201ENST00000623583 2518 ntBASIC18.25■□□□□ 0.51
SLC38A3Q99624 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC38A3Q99624 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A3Q99624 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 UPK3BP1-201ENST00000428678 509 ntBASIC18.24■□□□□ 0.51
SLC38A3Q99624 AC112907.2-201ENST00000448639 330 ntBASIC18.24■□□□□ 0.51
SLC38A3Q99624 KRT18P38-201ENST00000449496 1282 ntBASIC18.24■□□□□ 0.51
SLC38A3Q99624 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC38A3Q99624 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC38A3Q99624 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms